Salvia splendens (scarlet sage): 121741081
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Entry
121741081 CDS
T07627
Name
(RefSeq) vacuolar protein sorting-associated protein 32 homolog 2-like
KO
K12194
charged multivesicular body protein 4A/B
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03250
Viral life cycle - HIV-1
sspl03272
Virion - Hepatitis viruses
sspl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121741081
03272 Virion - Hepatitis viruses
121741081
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121741081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121741081
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspl04147
]
121741081
Membrane trafficking [BR:
sspl04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
121741081
Exosome [BR:
sspl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121741081
Exosomal proteins of other body fluids (saliva and urine)
121741081
Exosomal proteins of colorectal cancer cells
121741081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
DUF6437
Motif
Other DBs
NCBI-GeneID:
121741081
NCBI-ProteinID:
XP_041989709
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All DBs
Position
7:370556..374375
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AA seq
214 aa
AA seq
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MFTRIFGKPKQETNALATLDKLNETLEMLEKKEKVLLKKAAGEIEKAKEFTKAKNKRAAI
QCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGAAAMKAMQKAVNID
DVDKTMDEINEQTENMKLIQEALSTPIGAAADFDEDELEAELEELEGAELEEQLLQPATT
APAAPIRVPAGRQSANKVEDEDDELAELQREMAL
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgtttacgcggatatttggaaagccgaagcaagagacaaatgctcttgcaacattagat
aagttgaatgagactcttgagatgctggagaaaaaagagaaggttctgttgaaaaaggct
gctggagaaattgaaaaggccaaagaattcactaaagctaaaaataaaagggctgctata
caatgtttgaaaaggaaaaggctttacgagcaacaaatagaacagctggggaattttcag
ttacgcattcatgatcagatgataatgctagagggagcaaaagctacaacagaaactgtt
gatgccctgagaactggagctgctgcaatgaaagccatgcagaaggccgtgaatatcgat
gatgtggacaaaacaatggatgagatcaacgagcagactgaaaatatgaaactaattcaa
gaagcattgtcgacaccaattggtgcagcagctgattttgatgaggatgaattggaagct
gaactcgaagaacttgaaggagccgagctggaggaacagcttctccaacctgcaacaaca
gcccctgctgcccccattcgagtgcctgctggaaggcaatcagcaaacaaagttgaagat
gaagacgacgaacttgctgaactacaaagggaaatggccctttaa
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