Salvia splendens (scarlet sage): 121741198
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Entry
121741198 CDS
T07627
Name
(RefSeq) RNA helicase aquarius-like
KO
K12874
intron-binding protein aquarius
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121741198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121741198
Spliceosome [BR:
sspl03041
]
Complex B
Other components
Prp19-related factors
121741198
Complex C
121741198
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
AAA_30
UvrD_C_2
ResIII
UvrD-helicase
AAA_22
SLFN-g3_helicase
AAA
AAA_16
Motif
Other DBs
NCBI-GeneID:
121741198
NCBI-ProteinID:
XP_041989829
LinkDB
All DBs
Position
7:complement(21614307..21625714)
Genome browser
AA seq
1507 aa
AA seq
DB search
MTKVSGTGVYDFRRHRVAEYPVYGEAPPVPEKPTESRPLSNVPSSITLSEIQRDRLTRIA
AENWMKTADSAPTKPFSPDLAKEIYSTELTVKGGRKPVPLQRVMILEVSQYLENYLLPNF
NPETASFEHVMSMILMVNEKFRENVAAWICFYDRKDMFKSFLERVLRLKEGRSLTLSEKT
NYLLFMINAFQSLEDEVVSERIMRLASLECWHSLSYGRFQMELCLNENLIKKWRRIAKRA
RDGTKQGGNFDPTTMLEANFLRNLIEEFLEVLDSEVFSSISNEENDPVAHGSEYVNDACV
LYCERFMEFLIDLLSQLPTRRLVRPLVADVAVVAKCHLSSLYSHEKGKLFGQLVDLLQFY
EGFEINDHQGRQMTDDEVLQAHYKRLQAFQLLAFKKVPKLRELALANIGAINKRADLAKK
LSVLSAEELRDLVCAKLKLVSKDDPWSERVDFLIEVMVSFFEKQQSQKEAINALPLYPNE
QIMWDESLVPSINYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEAVP
HLLSYTNNEGETAFRGWSRMGVPIKEFRIRDVKQPKIGEVKPSAVTAEVTFSFSSYKAQI
RSEWNSLKEHDVLFLLSIRHSFEPLSAEEAEKATVPQKLGLQYVRGCEIIEMRDEEGTLM
NDFTGRVKRDEWKPPKGELRTVTVALDTAQYHMDVCDIAEKGADDVYSTFNILMRRKPKE
NNFKAILESIRDLMNETCIVPDWLHDIFLGYGDPSAAQWINRPDLLENADFKDTFLDANH
VKDSFPNYQVHFVHSDGTDNSDPCPPFRIKFPKNPDGAVHFQPGNAASTTSSNNSDAMED
DHSDKLELVVESYVPPDPGPYPQDQPKLNSVRFTPTQVGAIISGIQPGLTMVVGPPGTGK
TDTAVQILNVLYHNCPSQRTLIITHSNQALNDLFEKIMERDVPARYLLRLGQGEQELATD
LDFSRQGRVNAMLVRRLELLSEVERLARSLQLPEDVAYTCETAGFFWLLHVYSRWELFLA
ACADNKDKPTFIQDRFPFKEFFIDTPNPIFSGQSFEKDMRAAKGCFRHLKTMFQELEECR
AFELLKSTVDRSNYLMTKQAKIVAMTCTHAALKRKDFLNLGFKYDNLLMEESAQILEIET
FIPMLLQRQEDGYARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGIPYIE
LNAQGRARPSLAQLYNWRYKDLGDLPYVRENHIFRRANAGFSFDYQLVDVPDYHGRGESA
PSPWFYQNEGEAEYVVSVYIYMRLLGYPANKISILTTYNGQKLLIRDVISRRCVPYDFIG
PPHKVTTVDKFQGQQNDFVLLSLVRTRFVGHLRDVRRLIVAMSRARLGLYVFCRRSLFEQ
CYELQPTFQLLLQRPDHLGLNLQEFTAFTDRHVDDTGSVQLISGPDEMADLVNYRMHEVY
QSRVASYHLNESWSEHDNSVENSTANPNTSTGTDDVEMNGDDVEMQATVNVDVTDMPTDD
GKPNDST
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagtatccggcaccggtgtctacgatttccggcgacaccgggtggctgaatac
ccggtttacggggaggcgcctcctgtgcccgaaaagccgactgaatccagaccactatcc
aatgtgcccagctctattaccctaagcgagattcagagagaccgtctcaccagaattgca
gccgaaaattggatgaaaaccgcagattcagccccaacgaagcccttcagcccggacctt
gccaaagaaatttactccacggagttgaccgttaaaggggggagaaagccagtgccgctg
cagagggtaatgatactggaagtgagccagtacttagagaattacctattgccaaacttc
aatccagagactgcttcatttgagcatgtgatgtcaatgatactcatggtcaatgagaag
ttccgggagaacgtcgctgcatggatatgcttttatgacaggaaggatatgtttaaatca
tttcttgagagggtactccgtcttaaagagggaagaagcctgactctttcagaaaagacg
aattatctactcttcatgatcaatgcctttcagagcttggaggatgaagtagtgagtgaa
aggattatgcgattagcgagcctggagtgctggcatagcctatcgtatggacgttttcag
atggaactttgccttaatgaaaatctgataaaaaagtggagaagaattgcaaaacgagca
agggatggaactaaacaaggggggaattttgatcccacaaccatgttggaagcgaacttt
ttgagaaatctcattgaggaatttttggaggtgcttgattctgaggttttctcttccatt
tccaacgaggaaaatgatcctgttgctcatggttctgagtatgtgaatgatgcctgtgtc
ctctattgtgaaaggtttatggaattccttattgacctcttgagccaactgcctaccagg
agattagtgcgacctcttgttgctgatgttgcagtagttgccaaatgtcatttaagttct
ctgtatagccatgagaaagggaagctttttggacagttggttgacttgctccagttctat
gaaggatttgagattaacgatcatcagggtagacaaatgactgacgatgaggtgcttcaa
gctcattataagcgccttcaggcttttcagctgcttgcatttaaaaaagttccgaagtta
cgagaacttgcattggctaacattggtgcaatcaacaagcgtgctgaccttgccaaaaag
ctttcagtactttctgctgaggagttaagggatttagtatgtgctaagctcaaactggta
tcaaaggatgatccttggtcagaaagagttgacttccttatagaagttatggtttcattt
tttgagaaacaacagtcacagaaagaagcgatcaatgctcttccactataccccaatgag
caaataatgtgggatgaaagccttgtaccaagtatcaactactctggtgaagggtgtctg
gcacttccaaagctaaatttacagtttttaacacttcatgattaccttcttagaaatttc
aacctcttccgccttgaatcaacttatgaaatcagagaggatattcaagaagctgtgcca
catcttctctcatatacaaataatgaaggagaaactgcttttcgtggttggtcaagaatg
ggagtgccgattaaagaattcaggataagagatgtcaagcagccaaaaattggggaagtg
aagccttctgcagtgacagctgaagttacttttagcttttcgagctataaagcacaaata
agatctgaatggaattctcttaaggagcatgatgtcctttttttactctctattcggcat
tcttttgagcctctgagtgccgaagaggcagaaaaggcaactgttccacagaaacttggt
cttcagtatgtgcgcgggtgtgagatcattgaaatgcgtgatgaggagggaactctcatg
aatgatttcacagggagggtcaagcgtgatgaatggaagcctcccaaaggagaactgaga
actgtgactgttgcactagatactgcacagtatcatatggatgtttgtgacatagcagag
aagggtgcagatgatgtctatagcacatttaacatattgatgaggcggaaacctaaggag
aacaactttaaagcaattttggaatccataagggatctgatgaatgaaacatgtattgtt
cctgattggttacatgacatatttttgggttatggtgatccttctgctgcccaatggatc
aataggccagatctccttgaaaatgctgatttcaaagacacgttccttgatgctaatcat
gtcaaagatagctttccgaactatcaggttcactttgtacattcagatggcacggacaat
tctgatccatgtcctccatttcgtattaagttccccaagaatcctgacggcgcagtacat
tttcaacctggaaatgctgcatctacaacatcctcaaacaattccgatgctatggaagat
gatcattctgataaactggaacttgtagttgagtcttatgttcctcctgatccaggacca
tatccccaagatcaaccaaagctgaactctgtcagatttactcctacccaggttggagct
atcatttcaggcattcaacctggtttaactatggttgttggtccacctggtactggaaag
acagatacagctgtgcagattttgaatgttctataccacaattgtccttctcagagaact
ttgataattactcattcaaaccaggctttaaatgatctttttgaaaagataatggagaga
gatgtcccagcccgatatctacttcgacttggtcaaggtgagcaagaattggctactgac
cttgatttcagccgccaaggccgtgtgaatgccatgctcgttcggcggttggaactcctt
agtgaagtggagcgcctggcgaggtctctgcaactgcctgaagatgtagcttatacttgt
gaaacagctggttttttctggttgcttcatgtgtattcgcgctgggaactctttttggct
gcttgtgctgacaataaggataagccaacgtttattcaagaccgttttcctttcaaggag
ttctttattgacactccaaatccaattttctcgggccagtcttttgagaaagatatgcgg
gctgctaagggttgcttccgtcacctgaaaactatgtttcaggagcttgaagagtgccgg
gcatttgagttactgaagtcaacagttgatagatcaaattatcttatgaccaagcaagca
aaaatagtagccatgacatgcacccatgcagctcttaaaaggaaagattttctgaatttg
ggctttaaatatgataacttgctaatggaagaaagtgctcaaattttggaaatagagact
ttcatcccaatgttgctccaaaggcaggaagacggttatgctcgtcttaaacgctgtata
ttgattggtgaccatcaccagctaccccctgtcgtgaaaaatatggcttttcagaagtac
agccatatggatcaaagtcttttcacaagatttgtccgtctgggaattccctacattgag
ctcaacgcccagggaagagctagacctagtttagctcaactttacaattggagatataaa
gatcttggagatcttccatatgtgagagagaatcatatcttccgcagggcgaatgctgga
ttctcctttgactatcagttggtggacgttcctgattaccatgggagaggtgagtctgct
ccttctccctggttctatcaaaatgaaggagaggcagagtatgttgttagtgtgtatata
tacatgcgtttgcttgggtatccagccaacaagatatccatactgacaacatacaatggt
cagaaacttttaattcgtgacgtgatcagccgtagatgtgtcccatacgacttcattggt
ccaccccacaaggtaacaactgttgacaagtttcaagggcagcagaatgattttgtctta
ctatctctcgtgcgcactcgttttgtgggtcaccttcgtgatgtaagaagattgatagtg
gcaatgtctcgtgcaagattgggactttatgttttctgccgccgttctcttttcgaacag
tgttatgagctccaaccaacatttcaacttctgcttcagaggcctgaccatcttggtctg
aatttacaagagtttacagcatttacagatcgtcatgttgatgacacaggatctgtccaa
cttattagcggaccggatgagatggctgacttggtgaattacaggatgcacgaggtctac
cagtcacgggttgcgagctatcatttgaatgagtcttggtctgaacatgataattccgta
gaaaatagcacggcaaatccaaacacctctactggtacagatgatgttgagatgaatggt
gatgacgtagaaatgcaggctacagtgaatgttgatgtcacggatatgccaaccgacgac
ggtaagccaaatgattcaacctga
DBGET
integrated database retrieval system
