KEGG   Salvia splendens (scarlet sage): 121741503
Entry
121741503         CDS       T07627                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    121741503
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sspl03019]
    121741503
Messenger RNA biogenesis [BR:sspl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     121741503
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     121741503
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 121741503
NCBI-ProteinID: XP_041990208
LinkDB
Position
7:13957350..13960029
AA seq 132 aa
MSSSMSWAEPADVYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANVVLEGACERLI
VGDLYCDIPLGLYVMRGENVVLIGELDPLKMELPPNMVRVSEPEIRSAQKVEREASELMG
TMKKRMDFLDMD
NT seq 399 nt   +upstreamnt  +downstreamnt
atgagttcatcaatgtcttgggcggaaccagcggatgtctatctctctacttctcttgcc
agttatcttgacaagaaacttcttgtgttacttcgagatggacggaaacttttagggatt
cttcgatcgtttgatcagtttgctaatgttgtcctagaaggtgcatgtgagcgtcttatc
gttggtgatctatattgcgacattccattaggtctatatgtaatgcgtggagaaaatgtt
gttttgattggggagctggacccactaaagatggaactacccccaaatatggttcgtgtt
tcagaaccagagataagaagtgcacaaaaagtggagagggaggcgtcggagctcatgggt
accatgaaaaagaggatggatttccttgatatggattga

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