Salvia splendens (scarlet sage): 121741682
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Entry
121741682 CDS
T07627
Name
(RefSeq) vacuolar protein sorting-associated protein 36-like
KO
K12190
ESCRT-II complex subunit VPS36
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121741682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121741682
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspl04147
]
121741682
Membrane trafficking [BR:
sspl04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
121741682
Exosome [BR:
sspl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121741682
Exosomal proteins of colorectal cancer cells
121741682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Motif
Other DBs
NCBI-GeneID:
121741682
NCBI-ProteinID:
XP_041990494
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Position
7:10576268..10583629
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AA seq
437 aa
AA seq
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MAGAFLPSAELTASGRPVLKPGEIECSLLSTVDLLSEDTPSFPQLKSGVVILTTLRLLWI
PPENTSYANTCCFIPLSSVQNILSAKKSIKSMFQSPRIRFPVAATPQGVVAENGGSRSLI
ITLVVRGKTDPDSFLGKFWDAWRGRAWVATGSGLREGEGSSSGSGSLAVRMPVVGLAGIL
RKEQEMWESTDKSLQDAFQDLNALMSKAQEMVTLAEKMRSKLLSGSNNQASGAEDEEMGT
KEMQDWLLSVGIVSPVTKESAGALYHQQLSRQLADFIKIPLERAGGMINMIDVYCLFNRA
RGTELISPDDLLRACSLWEKFDVPVMLRKFDSGVMVIQSKSHSDEEVFARITSLIMKPEA
LVNGISAGDASRTLGVAPAVAKEYLLAAEVKGLLCRDVSPDGFRFYINFFPELNQEDIHM
VKDHSRYSTWTRAVLSR
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggccggagcgttcctcccgtcggcggagttgacggcaagcggccgccccgtgttaaaa
cccggtgaaatagagtgctctcttctctccaccgtagacctcctctcggaagacacgccc
tccttccctcagctcaagtctggcgtcgtcatcctcaccaccctccgcctcctatggatc
cctcccgaaaacacctcctacgctaacacttgttgcttcatccctctctcctccgtccaa
aacatactctccgccaagaaatcgatcaaatccatgttccaaagccccaggattcgcttc
ccggtcgccgccactccgcagggggtcgtggccgagaacggcggctctaggtcattgatt
ataaccttggttgtgagagggaagaccgatccggattcgtttttggggaaattttgggat
gcttggagagggagggcgtgggtggccaccgggtcaggtttgagggaaggggaagggtca
agttctgggtcgggctcgctggcggtgcgaatgccggtggttgggctggcggggatactg
aggaaggagcaggagatgtgggagagtactgataagagcttgcaggatgcttttcaggat
ttgaatgctctaatgagcaaggcacaagagatggtgacgctagctgagaaaatgagatca
aagcttctctctgggtcaaataatcaagctagtggggctgaggatgaggagatgggtact
aaggagatgcaagattggttgttgagtgttggtattgtatctcctgttacaaaggagtca
gctggtgctctgtatcatcaacaactttctcgtcagttggcagatttcatcaagatacca
ttagagagagctggaggaatgattaatatgatagatgtctattgcctgttcaaccgagcc
cggggcacagagttgatatctcctgatgatctactgcgagcatgctctctctgggaaaag
tttgatgtgccagttatgcttcgtaaatttgacagtggcgtcatggtgatccagagtaaa
agtcacagtgatgaagaggtatttgcaaggattacgtcattgattatgaagccagaggcc
ttagtaaatgggattagtgctggtgatgcttcaaggactctcggggttgctccagctgtg
gctaaggaatatcttcttgctgctgaagtaaaaggattgctttgtagagatgtcagtcct
gatggctttcgcttttacatcaatttctttccggaacttaatcaagaagatatacatatg
gttaaagatcacagtagatatagcacatggacaagggcagttttatccaggtaa
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