Salvia splendens (scarlet sage): 121741738
Help
Entry
121741738 CDS
T07627
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121741738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121741738
03110 Chaperones and folding catalysts [BR:
sspl03110
]
121741738
03029 Mitochondrial biogenesis [BR:
sspl03029
]
121741738
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspl04147
]
121741738
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
121741738
Messenger RNA biogenesis [BR:
sspl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
121741738
Chaperones and folding catalysts [BR:
sspl03110
]
Heat shock proteins
HSP60 / Chaperonin
121741738
Mitochondrial biogenesis [BR:
sspl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
121741738
Exosome [BR:
sspl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121741738
Exosomal proteins of other body fluids (saliva and urine)
121741738
Exosomal proteins of breast cancer cells
121741738
Exosomal proteins of colorectal cancer cells
121741738
Exosomal proteins of bladder cancer cells
121741738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
121741738
NCBI-ProteinID:
XP_041990560
LinkDB
All DBs
Position
1:complement(10167883..10171725)
Genome browser
AA seq
593 aa
AA seq
DB search
MASANTISTASILSSSSKQNELKNGKVNQLLQQGQRIGQKQSRNRFVVKANAKEIAFDQK
SRSAMQSGIDKLANAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDAMENAGAA
LIREVASKTNDSAGDGTTTASVLAREVIKLGLLSVTSGANAVAVKKGIEKTVQGLVDELE
KKARPVKGRDDIKAIASISAGNDEIIGTMIADAIDKVGPDGVLSIESSSSFETTVDVEEG
MEIDRGYISPQFVTNPEKLTVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAE
DVTGEALATLVVNKLRGIVNVAAIKAPGFGERRKALLQDIAILTGAEYQATDLGLRVEDT
DIDQLGIARKITISKDSTTVIADAASKDELQARIAQLKRELSETDSVYDSEKLAERIAKL
SGGVAVIKVGAATETELEDRKLRIEDAKNAIFAAIEEGIVPGGGAALVHLSTFVPEIKDK
LEDADERLGADIIQKALVAPAALIAQNAGVEGEVVVEKVRANEWEFGYNALTDSYENLVE
SGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKAKPKAAAAAGQPPAGSYAV
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgcaaacacaatctcgaccgcctccatcctctcttcctcatctaaacagaat
gagttgaagaatgggaaggtgaaccagttattgcagcaggggcagaggatcgggcagaag
cagtccaggaatcgctttgtggtgaaggccaatgctaaggagatcgcctttgatcagaaa
tcgcgctctgcaatgcagtccgggatcgataagctcgccaacgccgtcggtctcactctt
gggcccaggggaaggaatgttgtcttggatgagtttgggtcccccaaggtggtcaatgat
ggggttacaattgcacgtgccattgagttgcctgatgctatggaaaatgctggcgctgct
ctgattagggaggttgctagcaagacaaatgattccgccggtgatgggactaccactgca
tctgttcttgcacgtgaagttatcaaacttggcctgctcagtgttacatcgggtgccaac
gcagttgctgtgaagaaaggaattgagaaaaccgtacagggtttagttgacgagctcgaa
aagaaggctaggccagtcaagggccgggatgatattaaagctattgcctccatctctgct
gggaatgatgagataattgggacaatgattgctgatgcgattgacaaggttggaccagat
ggtgttctgtccattgagtcatcctcctcctttgagaccactgttgatgtagaagaagga
atggagattgacagaggatatatctctccgcaatttgtcacaaacccagagaagctgact
gttgagttcgagaatgctagggtattagttacagaccagaagatctcagcaatcaaggac
atcattcctttgttagagaaaaccacccagttaagggcacctttactcattattgctgaa
gatgtcactggagaagctttggcaaccctcgttgtaaacaagctccgaggtatcgtaaat
gtggcagccatcaaagcccctggatttggagaacggaggaaagctcttcttcaagatatt
gccattttgactggggctgagtatcaagctactgatttgggattgcgtgtggaagacact
gatattgaccagctgggtattgctagaaaaataaccatctccaaggactcgacaactgta
attgctgatgctgcatccaaggatgagttgcaggctagaattgctcaacttaaacgggaa
ctttctgagactgattcggtttacgactccgagaaacttgctgagagaattgccaagctg
tctggtggtgttgctgttatcaaagttggtgctgcaacagaaactgagcttgaggaccgc
aagctccgtattgaagatgccaaaaatgcaatatttgctgccattgaggaaggaattgtg
cctggtggcggagctgcgttggtgcatctctcaactttcgtcccagagatcaaggacaag
cttgaagatgccgatgagcgacttggtgctgatatcatacaaaaggctttagtagcgccg
gcagctttaattgcccaaaatgccggggtggaaggcgaagtagttgtggagaaagtgagg
gccaatgaatgggagtttggttacaacgcgcttactgattcgtacgagaacttggtagag
tctggagtgattgacccagccaaggtgacgagatgtgccctgcaaaacgcagcttcagtt
gctggaatggtgctcacaacacaagccattgtggtcgagaaagccaagcctaaggcagca
gccgctgctggtcagccacctgcaggcagctatgcagtctaa
DBGET
integrated database retrieval system
