Salvia splendens (scarlet sage): 121741853
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Entry
121741853 CDS
T07627
Name
(RefSeq) oligoribonuclease-like
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121741853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121741853
03009 Ribosome biogenesis [BR:
sspl03009
]
121741853
Messenger RNA biogenesis [BR:
sspl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
121741853
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-60S particles
RNases
121741853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
121741853
NCBI-ProteinID:
XP_041990716
LinkDB
All DBs
Position
7:complement(9445987..9450465)
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AA seq
267 aa
AA seq
DB search
MDRLSNSFSLLELDAEDAKEHNLTATIAADGCETRDSGKGVDNGLEDGTLLEKESVYQQS
SESIVGDYKMPLVWIDLEMTGLNIEVDRILEIACIITNGNLTKSIEGPDLVIHQPKECLD
KMGEWCQEHHGESGLTERVLQSTISEQEAENQVIEFVKRHTGTAYTPLLAGNSVYMDLIF
LRKYMPDLAALFSHNLVDVSSIKALCLRWYPRDRRKAPQKENKHRAMDDIKESIAELKFY
KENIFKPKKSEEMRRLLDKDQLLKLSD
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggacaggctctcgaattcattttcactgcttgagctggacgcagaagatgctaaggaa
cacaatctaactgccaccatcgccgctgatggttgtgaaacgagagatagtgggaaggga
gtagacaatggcttagaagatggaacactgttggaaaaagagagtgtgtatcaacaaagc
tcagaaagtattgtgggagattacaagatgccactcgtgtggattgacctggaaatgact
ggtttaaacattgaagttgataggatcctggagattgcttgcattattacaaatggaaat
ttgaccaagtccattgagggtccagatttagttattcatcaaccaaaggagtgtcttgat
aaaatgggagaatggtgccaagaacaccatggagagagtggtttgaccgagagggtcctt
caaagtacaataagcgaacaagaagctgaaaatcaggtcattgaatttgtgaagagacac
accggcacagcatatacacctctgcttgctggaaattctgtctacatggatcttatattc
ttaaggaaatacatgccagatttggctgcccttttctctcacaatcttgttgatgtcagc
agtatcaaggcattatgtcttcgatggtacccaagagaccgtagaaaggctcctcaaaag
gaaaataaacacagagcaatggatgacatcaaggaaagcatagcagaacttaaattctac
aaggagaatatattcaaaccgaagaagtctgaggaaatgaggagattactagataaggat
cagctactaaagctctctgattag
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