Salvia splendens (scarlet sage): 121741869
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Entry
121741869 CDS
T07627
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121741869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121741869
03009 Ribosome biogenesis [BR:
sspl03009
]
121741869
04131 Membrane trafficking [BR:
sspl04131
]
121741869
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspl04147
]
121741869
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
121741869
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
121741869
Membrane trafficking [BR:
sspl04131
]
SNARE
SNARE associated proteins
Others
121741869
Autophagy
Aggrephagy
Other aggrephagy associated proteins
121741869
Exosome [BR:
sspl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121741869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
AAA_33
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
AAA_18
Parvo_NS1
ATPase_2
IstB_IS21
Viral_helicase1
ABC_tran
AAA_7
Vps4_C
NB-ARC
NACHT
TsaE
AAA_24
ResIII
DUF815
AAA_lid_PRS2_C
Zeta_toxin
SLFN-g3_helicase
Sigma54_activ_2
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
121741869
NCBI-ProteinID:
XP_041990729
LinkDB
All DBs
Position
7:complement(5137809..5141829)
Genome browser
AA seq
807 aa
AA seq
DB search
MSNPAESSDSKGAKKDFSTAILERKKAANRLVVDEAVNDDNSVVSLHPATMEKLQIFRGD
TVLIKGKKRKDTVCIALADDACEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTIEGLTGDLFDAYLKPYFLEAYRPVRKGDHLLVRGGMRSVEFKVVETDPGEYCV
VAPDTEIFCEGEPIRREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSEDVDLERISKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFHTALGISNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGSVGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPLSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIEREKKRLDN
PDSMDEDETDEVSEITPSHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFPE
ATGGGAPGSDPFAAPAGGAADDDDLYS
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacccagctgagtcgtccgattcgaaaggtgcgaaaaaggacttctcaaccgcg
attttggagaggaagaaggcggccaatcgccttgtcgtcgatgaggctgtcaacgacgac
aactccgtcgtctccctccaccccgccaccatggagaagctccagatttttcgtggagac
actgttttgatcaaggggaagaaaagaaaagatactgtctgcattgctcttgctgatgat
gcatgtgaagagccaaagattaggatgaacaaggttgtcaggtcaaacttgagggttcgg
cttggggatgttgtatctgttcatcagtgtccagatgttaaatacggaaagcgtgtgcac
atactacccatagatgatacgatagaaggtctcactggggatctttttgatgcatatctc
aaaccatactttcttgaagcatatcgccctgtgaggaaaggagaccatcttcttgtgaga
ggtgggatgaggagtgtggaatttaaggttgttgagacagatcctggggaatattgtgtt
gtggctcctgataccgagatcttctgtgaaggggagcctatcaggagagaggatgaagat
agactagatgaagttggctatgacgatgttggtggagttcggaaacagatggctcagatc
cgtgagttagtggagttgcctctgagacatcctcagctattcaaatctattggtgtgaag
cctccaaaaggaattctactttatggacccccaggttctggaaagactttgattgctcga
gctgttgctaatgaaactggtgctttctttttcttgattaatggtccagaaattatgtct
aaattggctggagagagtgagagtaatctgagaaaggcatttgaggaggctgagaagaat
gctccatctattattttcattgatgaaattgactcaatagctcctaagagagagaaaaca
catggagaagttgagaggaggattgtttctcaactcctgactctcatggatggtttgaaa
tctcgtgcgcatgttatcgttatgggcgcgactaaccgaccaaacagcattgaccctgct
cttaggaggtttggtaggtttgacagggagatagatattggtgttcctgatgaagttgga
cgccttgaagttcttaggattcataccaagaacatgaagctttctgaagatgttgattta
gaaagaatctcaaaggacacccatggctatgtcggtgctgatcttgcagctctctgcaca
gaagctgcactacagtgcatcagagagaaaatggatgttatcgacttggaagatgattca
attgatgcagagatactgaactctatggccgtaacaaatgagcacttccatactgctctt
gggataagcaatccatctgctttgcgagagacagtagttgaagtacccaatgtctcttgg
gaagatattggaggacttgaaaatgttaagagggagcttcaggagactgttcaatatcct
gtggaacatccagaaaagtttgagaaatttggcatgtcgccttcaaagggtgttttattc
tatggtcctcctgggtgtggtaagacgctgcttgccaaggcaatcgcaaatgaatgtcag
gccaattttatcagtgtgaaagggcctgaactgcttaccatgtggttcggagagagtgaa
gctaatgtccgtgaaatatttgacaaggctagacaatctgctccctgtgttctcttcttt
gacgagcttgactctattgctacccagagaggaggcagtgttggtgatgcaggcggtgct
gctgatagagttctcaaccaacttctcacggagatggatggcatgaatgccaaaaagact
gttttcattattggggccactaacagacctgacataattgatcctgcgcttcttcgccca
ggtcgtcttgatcaattgatatacatccctctgccagatgaggattctcgtcatcaaatc
ttcaaagcctgccttagaaaatctcccctttccaaagatgtcgatctacgagctctggcc
aagtacactcaaggatttagtggggcagacatcacagagatttgtcagcgggcttgcaaa
tatgccataagagagaacatcgagaaagacatagaaagagagaagaagagattagataac
cccgactcaatggatgaagacgagactgatgaagtgtcggagatcacaccctcacatttt
gaggagtcgatgaaatatgcccgtagaagtgtgagtgatgctgatatacgcaagtatcag
gcctttgcacagaccttgcagcagtctcgtggctttgggacggaattcaggtttcctgaa
gccaccgggggtggggcacctggatccgacccatttgcagcccctgccggaggagctgct
gatgacgacgacttatatagttag
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