Salvia splendens (scarlet sage): 121741936
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Entry
121741936 CDS
T07627
Name
(RefSeq) exopolygalacturonase clone GBGE184-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl00040
Pentose and glucuronate interconversions
sspl01100
Metabolic pathways
Module
sspl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121741936
Enzymes [BR:
sspl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
121741936
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Beta_helix
Motif
Other DBs
NCBI-GeneID:
121741936
NCBI-ProteinID:
XP_041990889
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Position
1:18456486..18458276
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AA seq
415 aa
AA seq
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MATSCVHMMGSLALSISCLIIINTIAAADEQRRLLQAETVFDITKYGAKGDGTTDDAMSL
IQAWRAGCESTGGGGDFGPAREILDGGSSPKERCKATPPMIIDIQSTLLENPNPSAYSNE
KWILIEHADNLKITGGGTLNTQGANAWKFAKEEARMPVSFTFQSSQNGDISNLNLVDAMG
FHSKLIDSSNIKVTKMTITAPDESPNTDGIHLSNATNVEITDSVIGTGDDCISIGTCSKN
ILVKNVKCGPGHGLAVGSFGKHPYELSVGNITFCSCTLTGTTNGARIKSYHKSLVMTATN
IVFEDLTLDSVKNPIIIDQHYFSKMVAEQSNVKISDVHFRRIKGTTTSEIPIMFNCSTTN
PCENTELADIDLKPVGGCQDRLICLSERHRNQAFRHCHPSSSHLLGFLLTSKRME
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggctactagttgtgttcatatgatgggctcccttgccctaagcataagctgtttgatc
attatcaacaccattgctgctgccgacgaacaacgccgcctcctgcaggctgagaccgta
ttcgacatcaccaaatatggtgccaagggcgatggcaccaccgatgatgcaatgtcgctt
attcaagcatggagggcaggatgcgagagcacaggggggggcggggattttggtccagcc
cgggaaatacttgatgggggaagtagtcctaaggagaggtgcaaggcaacacctccaatg
atcatcgatattcagagcaccctgttggaaaatcccaacccgagcgcctattccaacgag
aagtggatcttgattgagcacgcggacaacttgaagatcacgggcggaggcacccttaac
acccaaggagcaaatgcatggaagttcgccaaagaagaggcacgcatgcccgttagtttc
acgttccaatcgtcgcagaatggggacattagcaacctaaatttagtggatgctatggga
ttccatagcaagttgattgacagtagtaacatcaaggtgacaaaaatgaccatcactgcc
cctgacgaaagccccaacacagacggaatccatctcagcaatgccaccaatgtggagatt
accgactccgtcattggaaccggtgatgattgcatctccattggtacatgcagcaaaaac
atcttggttaaaaatgtcaaatgcggacccggacatggtcttgctgtggggagttttggg
aagcatccctacgaactgagcgtcgggaacatcaccttctgtagttgtaccttgacgggc
acaaccaatggtgcccgaatcaagagctaccacaagtcgctggtgatgactgccaccaac
atcgtgttcgaagatctgaccttggatagtgtcaagaatcccatcatcatcgatcaacat
tacttctccaagatggttgctgagcaatccaatgtcaaaatcagcgacgtccacttcaga
agaatcaagggcaccacaacctctgaaattcctatcatgttcaactgcagcacaaccaac
ccgtgcgaaaacaccgaattggctgacattgacttgaagcctgtgggggggtgccaagac
cgtctcatctgcctgtcagagcgccaccggaatcaagccttccggcactgtcatccctcc
tcctcccacttgctaggctttttattaacatcaaaaaggatggagtga
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