Salvia splendens (scarlet sage): 121741956
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Entry
121741956 CDS
T07627
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121741956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121741956
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
121741956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_14
RuvB_N
AAA_22
AAA_5
AAA_16
Rad17
AAA_2
RNA_helicase
IstB_IS21
AAA_18
NPHP3_N
AAA_28
AAA_33
ABC_tran
Mg_chelatase
nSTAND3
ATPase_2
TsaE
DUF815
AAA_7
CPT
nSTAND_NTPase5
Parvo_NS1
HTH_49
DUF3931
Motif
Other DBs
NCBI-GeneID:
121741956
NCBI-ProteinID:
XP_041990879
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All DBs
Position
7:12063076..12070230
Genome browser
AA seq
724 aa
AA seq
DB search
MTREKGSAAVALRRHIESVSSGKENLTDEQVVGLLCSLHRLTYCRLDRNLLTERVAKITQ
LQRRRAGVISQDPAPFSARRQKINEPAPFSAKRKKINEVSGSPLEKGDCSINPKTIWNLG
RSDELGHGRGEMNMNGGRSESESEKHSRPIFRDFLGITSVIDELKQEVVRPLHQLKLLRH
LGVEPTSRILLHGPPKCGKTMLARAVANEARLPLFEISVARLMRGDLGAAEEKIRRLFLT
AYIRAPSVVFIDEIDAMTSVKKRTLKEVEYRIVDQLMAFMDGRDRPTGPVNDDVSFESSN
STPGYVLVIGATNRPDALDTALRRLFDREFALGVPDECERFDILSALTRNLKVEVGFDPR
KLARSTMGYVAGDLVALAKKAGMLAVHSIMGKRNSEYLKEPRHMVEHEECYTRPFYDEEL
ENLSITMKHFVQAGKMVQPSAIMKDFFTTLHAKWDDVGGLEALKSEFERHVVKAIKYPRV
YEDIKTSVLSSFLLCGPSGCGKTLLVKAVAKEAGANFMHIKARDLLKFGDQCEMVVHNIF
SYASTHIPCVLFFDELDVMPSRDDVPRWPDFRKLISELSDTELTMEGVLVFGATNRPEIV
SHSSLIKTQFDRLLYVPLPTPEERGAILKALTRCKPIDPEVDLMALGNDVACENFSGRDL
FALVTEASKFAINRPALSVGNRMTIKDADFESALAKVSPSLSATEVKKWELQSKKIVVHS
ISVD
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgacgagagaaaaaggcagcgccgctgtggctctccgccgccacatcgagtccgtctcc
agcggcaaagaaaacctcaccgacgagcaagtagtaggcctactctgctcgttacaccgg
ctcacctactgccgtcttgatcgcaacctcctaaccgaacgcgtcgccaaaatcacccag
ctccagcgccggagagcaggcgtcatttcccaagatcccgctccgttctcagccagacgg
caaaaaatcaatgagcccgctccgttctcagcgaaacggaaaaaaatcaatgaggtctcc
ggcagtccattggaaaagggcgattgtagtattaatccaaaaacgatttggaatttaggg
cggagtgatgaattaggccatggcaggggagagatgaacatgaatgggggaaggagtgag
agtgagagtgagaaacatagtcggccaatttttagggatttcttgggaattactagtgtg
attgacgaattgaagcaggaggtggttcggccactgcatcagctgaagctgctgcgccac
ctcggagtcgagcctacgtctcgaattctgctgcatgggccacccaaatgtgggaagacc
atgttggccagagccgttgccaatgaggccagattgccattgtttgaaatctctgttgct
cgattgatgcgtggagatttaggtgcagcagaagaaaagatccgaagattgttcttaaca
gcatacattagagcaccatctgttgtgttcattgatgaaattgatgcgatgacttcagta
aagaaaaggacactgaaggaagtagagtatcgcatagtggatcagttgatggcttttatg
gatgggcgagacagacctaccggaccagtaaatgacgatgttagttttgaaagttctaat
agtacacctggctatgtgctggtgattggagccaccaataggcctgatgctcttgacact
gccttaaggcgtttatttgatcgtgaatttgctttaggtgttccagatgaatgtgaaagg
tttgacattctgtcagctctaacgcgtaatcttaaggttgaagttggttttgatcccagg
aaattagctaggtccactatgggttatgtagcaggagatttggtagctctagcaaaaaag
gctggtatgcttgctgtacatagtatcatgggcaagagaaactcagagtatctcaaagaa
ccgaggcacatggttgaacatgaagaatgttacacgcggccattttacgatgaagaattg
gagaaccttagcataaccatgaaacactttgtgcaagctggaaagatggttcaaccgtct
gcaattatgaaagattttttcaccacactacatgcaaagtgggatgatgttggaggtctt
gaagcattgaaatcggagtttgaacgccatgtagttaaagcgataaagtatcctcgagtt
tatgaggacataaagacgagtgtccttagctcctttctcctttgtggtccttctggctgt
ggaaagacattgcttgtcaaggctgtggctaaagaagcaggagcaaatttcatgcatatc
aaggcccgtgatctattgaaatttggcgatcagtgcgaaatggtagtgcacaacatattc
agttatgcaagcactcacatcccatgtgtacttttcttcgatgagctggacgtaatgccc
tcacgtgatgatgtaccacgatggccggactttagaaagctaatatcagagctgagtgat
acagaattaacgatggaaggtgttcttgtgtttggtgcaacaaacaggcctgaaattgtg
agtcattcttcactcatcaaaacacaatttgataggcttttgtatgttcctctccctact
ccagaagagcgaggtgcgatattgaaagctcttactcgatgcaagccaatagatcccgag
gtggaccttatggccctaggaaacgacgtggcctgtgaaaattttagtggccgtgatcta
tttgctttggtaacagaagcttctaaattcgccattaatagaccagcattgtctgttggg
aaccgcatgacaatcaaagatgcagatttcgagagtgcgttggcgaaagtctccccttct
ctctcagccacggaagtcaagaagtgggagcttcagtctaagaagattgttgttcatagc
atttctgtggactga
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