KEGG   Salvia splendens (scarlet sage): 121741987
Entry
121741987         CDS       T07627                                 
Name
(RefSeq) THO complex subunit 4A-like
  KO
K12881  THO complex subunit 4
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03013  Nucleocytoplasmic transport
sspl03015  mRNA surveillance pathway
sspl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121741987
  09122 Translation
   03013 Nucleocytoplasmic transport
    121741987
   03015 mRNA surveillance pathway
    121741987
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sspl03019]
    121741987
   03041 Spliceosome [BR:sspl03041]
    121741987
Messenger RNA biogenesis [BR:sspl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     121741987
    TREX complex
     121741987
Spliceosome [BR:sspl03041]
 Complex C
  Other components
   EJC/TREX
    121741987
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    121741987
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3 RRM_10
Other DBs
NCBI-GeneID: 121741987
NCBI-ProteinID: XP_041990923
LinkDB
Position
1:complement(10835200..10840475)
AA seq 231 aa
MSGAALDMSLDDLIKNNKKSGRGRAAGSGPARRPTNRFANRVTPYSAPKAPETAWGHDMF
SDGGRSSSIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYVVHYDRSGRSKGTAEVLF
SRRQDAMAAIKRYNNVQLDSKPMKLELVGINITAPDAGAGGFTSAGSFGDSNVAPRSGQG
RGGFGRPRGGRGRGLGRGRGQGRGRRGGEKVSAEDLDADLEKYHADAMQTN
NT seq 696 nt   +upstreamnt  +downstreamnt
atgtcaggcgctgcgctcgacatgtctctcgacgatctaattaagaacaacaagaaatct
ggcagaggtcgcgccgccggttctggccccgctcgccgccccacgaaccgtttcgctaat
cgcgtgacaccctattccgctcccaaggctcctgagacggcttggggccatgacatgttc
tcagatggcggtcgatcttccagtatagagacagggaccaagttgtatatttccaatttg
gattatggggtttcgaatgaggatattaaggaactgttttcggaggttggagatctgaaa
agatatgttgtacactatgataggagtgggcgatcgaagggtaccgctgaagtactcttc
tcaagacgacaagatgctatggctgctatcaagcggtataataatgttcagcttgacagt
aaaccaatgaaactagaacttgttggaataaacattacagcgcctgatgctggcgctgga
gggtttacttctgctggttctttcggtgattcaaacgtagctcctcgaagcggacaagga
agaggtggttttggaaggccacgagggggaagaggtcgtggattaggaagaggtcgtgga
caaggaagagggcgccgcggtggtgagaaggtatctgctgaagatcttgatgctgatcta
gagaagtaccatgcagacgcaatgcagacaaactaa

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