Salvia splendens (scarlet sage): 121741993
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Entry
121741993 CDS
T07627
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121741993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121741993
Enzymes [BR:
sspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121741993
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
U-box type E3
121741993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
Neurochondrin
Arm_2
zf-RING_UBOX
KAP
HEAT_EZ
MLKL_N
zf-C3HC4_4
zf-Nse
zf-C3HC4_2
BORCS6
zf-C3HC4
MCAfunc
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
121741993
NCBI-ProteinID:
XP_041990935
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All DBs
Position
1:10892567..10898693
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AA seq
655 aa
AA seq
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MDDEDKAALSRKLIDLVADISAIPDYRISVKRQYTNLARRLKLLIPMFEEIRDTRVPLPE
DSIRALAALVTALASAKELLRFGSEGSKIYLVLERDKIMSRFQELTDELEQALSGISFEK
LDISDEVKEQVELVLAQFRRAKGRVDAPDVELYEDLMCIYHKNNDAEEDIDVLRRLVDRL
QLSSIADLTQESLALHEMVGATGGDPEESIEKMSMLLKKVKEFVQTTNPNLDSTAAENSS
LKSSGGKTQTEANQKNFVIPDDFRCPISLELMMDPVIVSTGQTYERSCIEKWLEAGHSTC
PKTQQALTSTAVTPNYVLRSLIAQWCEANGIEPPKPPGSSCPKPGSACSPAEHSKIGDLL
CKLTSGIPDDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVQLLTTSDSRTQEHAVTAL
LNLSIFEDNKGSIISSGAVPRIVHVLKKGSMEARENAAATLFSLSVVDENKITIGAAGAI
PPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRARVIPTLMQLLTEPQGTMVDEAL
AILAILSSHPEGKAAIGDAEAVPVLVDVIGNSSPRNKENAAAVLVHLCSGEQQYLGKAQE
LGVMGPLLDLAQHGTDRGKRKATQLLERMNRFVETQKAARAAQAENQSNTESGLK
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgaagacaaggccgcgttgtcgcggaaactcatcgatctggtagccgatatc
tcagcgattcccgactacagaatctccgtcaagaggcagtacaccaatctagctcgccgc
ctcaagctgttgatcccaatgttcgaagagattcgcgataccagagtgccgctgcccgag
gactccatcagagcgctggcggctctcgtcaccgcgctcgcctcggctaaggaattgctc
cgcttcggtagcgagggcagcaaaatttatctggtcttagagagggataaaattatgagt
agatttcaagaattgacagatgagttggagcaagctctgagtggcatttcttttgagaaa
cttgacatatcagatgaagtgaaggagcaggttgagcttgttcttgctcagttcagaaga
gccaagggaagggtagatgcaccagatgttgagctgtatgaggatcttatgtgtatttac
cacaagaacaatgatgctgaagaagatatagatgtattaaggagattggtagacagacta
cagctcagtagtattgccgacttaactcaagaatcactagctttgcatgagatggttgga
gccactggtggagacccagaggagagcatagaaaagatgtcaatgctgttaaagaaagtt
aaggaatttgtgcagacaacaaatccaaatcttgattccactgcagctgagaattcttcc
ctgaaaagtagtggtggaaaaacacagactgaagcaaatcagaagaactttgttatacca
gatgactttcgatgtcctatctccttagagctgatgatggatcctgtcattgtctcaaca
ggacagacatatgaaaggtcgtgtatcgagaaatggctggaagcagggcatagtacctgt
cccaagacacagcaagctcttactagcactgctgtaacaccaaattacgttctcagaagt
ctcatagcacaatggtgcgaggcaaacggcatcgaaccacccaagccaccgggcagctct
tgccccaagcctggatctgcatgctcccccgcggagcattccaagataggagaccttctc
tgtaagcttacatctggaatccctgatgatcagaggtctgcagcaggtgaaatccgcctc
cttgcaaagcgtaatgctgacaaccgtgtggctattgctgaagctggcgctatccctctg
cttgtccagcttttgactacttctgattcccgcacacaggagcatgctgttactgcactt
ctcaacctttccatattcgaagataacaaaggaagcataatatcttctggcgcggtgcct
aggatagttcacgtgctcaagaaagggagcatggaagcgcgggaaaatgctgccgccaca
ctgtttagcctctcggtagtagacgaaaacaagataactattggtgctgcaggggccatt
cctccattggtgacactacttagcgaaggaacccaacggggaaagaaagatgctgcgaca
gcgctcttcaacttgtgcatataccaaggcaacaagggtaaggctgtgagggcgcgcgtc
attcccacactgatgcaactgctgaccgagcctcaaggcaccatggtggatgaagcgctt
gcgattctggcgattttgtccagccacccggaaggaaaggcagccattggagatgctgaa
gcagtaccggttttggttgatgtcatcggcaacagctcacccaggaataaagaaaatgcg
gccgccgtgctggtgcacctctgctcgggagagcagcaataccttggcaaggcgcaggaa
ctcggtgtgatgggaccgcttctcgatttggctcagcatggcacggatagaggtaaacgg
aaagccacccagctgctggagcggatgaacagatttgtggagacacagaaggcggcacgg
gcagcgcaggcggagaatcaatcaaacacagaatcaggcttaaaatag
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