Salvia splendens (scarlet sage): 121742019
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Entry
121742019 CDS
T07627
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein NUP133-like
KO
K14300
nuclear pore complex protein Nup133
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121742019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121742019
03036 Chromosome and associated proteins [BR:
sspl03036
]
121742019
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121742019
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121742019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Acetyltransf_10
Motif
Other DBs
NCBI-GeneID:
121742019
NCBI-ProteinID:
XP_041990964
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All DBs
Position
7:complement(37084925..37092636)
Genome browser
AA seq
1328 aa
AA seq
DB search
MFSPPAKKSGLSARKNVFDRRDEVSTPLADNRRPLLDSPTVVNRPATGTPAPWTSRLSVL
ARIPPAKRSDRGDETDSVQPVYVGEFPQEVRDAQIMSSQNHFPADTSISGGMDKATTFAW
IVCGNKLFIWNHLIASASRKCIILDLDSVTSENGEMGKGCSQNNNWLVCLVNWHCSKKTG
SKGTQQPSPAGIVMCNKKTRTVVFWPDIYNANVVPPLSCVASSEFEATYLRQNGQSKLSK
QWQNDKFGNNFGNLSSINSLIASAIPSATHSCIALACSSDGQIWRFLCTPTGIEPNHIEH
GMSSTFSPGVDSSQLVTSKGYPRSLTWHTFNHSSDDTTRQFLLLTNHEIQCFTLKLSAEF
NVSELWSHEIIGTDGDLGIQKDLAGQKKIWPLDMDIDADGKVITVLVAIFCKDRVTSSSY
TEYSLLTMQYKSGVDITKPLGEIVLEKKAPIQVIVPKARVEDEDFLFFMRLKVGGKPAGS
AIILSGDGTATVSHYWRSSTKLYQFDLPHDAGKVLDASVFPSLDDSEDGAWVVLTEKAGV
WAIPERAVILGGVEPPERSLSRKGSSNAQSLQDERRNFPVPGNIAPRRASSEVWDAGDRQ
RPGLTGVSRRSPQDEESEGLLSQLFHEFLLSGHVDGVLDKLKNSRAFEXEGGTNVFTRIS
KSIVDTLAKHWTTTRGPEIALSLASAQLVEKQQKLQKFLQFLALSKCHEELCSRQRESMQ
IIMEHGEKLAGMIQMRELQNTISHESTSGLGSSYSSDTHTSGALWDLIQLVGQRARRNTV
LLMDRDNAEVFYSKVSDLEEVFHCLERQLEYIISEDMPAPVQFCRVCELSSACVMLFHAA
FQYKSEYHLWYPPPEGLTPWYSKTVVWNGLWSVASFMLLLLNEANRLDGSEKFDFYSNLE
LLSEVLLESYSNAITAKAERKEDPRTLLEEYWTRRDALLDALYKQVKSFVEAKLKDSAEE
NKEQHNDTLMTLSSKLLSIAKRHEAYRTVWSICCDLDDSELLQNLMHESMGPKGGFSCFV
FKQLYESKQLSKLMRLGEEFPDELATFLKLHPDLLWLHEVFLHQFSSASETLHALSLSKD
DSSVSIMKGTEATGSRRQLSLASRKHFLNLAKISAMAARDVGYELKVRRIDADLNILQLQ
EKILTLLPDEEKQSIGEKLLPPIDLIELCLRIQHPEPSLRAFDLFLWTSASFLRNNTSLL
EDCWRNAANQDNWGELYQRSITEGWSDERTIEVLKKTVLFQASSKCYGPDAETFDGIGFN
EVLPLRLESPNDPDSKYANSSVEAVLMQHKDYPEAGKLMLFALMVGSEWDASNAPPSVMD
CEGSSPTE
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgttctctcctccagcgaagaaatcaggcttaagtgctcgtaaaaatgtgtttgatcgg
agagatgaagtttccacgccgctcgccgataaccggaggccgttgctcgacagccccacc
gtcgtcaatcgcccggccacgggcacccctgccccttggacctctcgcctttccgttctg
gccagaatcccacctgcaaaaagaagtgacaggggagacgagacagacagtgtccagcct
gtctatgttggggagttccctcaagaagtacgtgatgctcaaatcatgtcgtcacagaac
cattttcctgctgatacatccatctctggtggaatggacaaggctacaacttttgcttgg
attgtctgtggaaacaaactcttcatatggaatcacttaatagcttctgcttcaagaaaa
tgcatcatccttgaccttgattctgtcacatcagaaaatggagagatgggaaaaggttgt
tctcagaataataattggctagtttgtctcgtcaactggcactgctcaaagaaaactggc
agcaagggaactcaacagcctagtcctgctggaattgtaatgtgcaataagaagactcgc
actgtagttttctggccggatatatataatgctaatgtggttccaccactctcttgtgtt
gcttcttctgagtttgaagcaacttatttacgtcaaaatggacaatcgaagttaagcaaa
cagtggcagaatgacaaatttggcaacaattttggaaatttgagttccatcaattcattg
attgcttcagctatcccttctgccacccacagctgcattgctctagcatgtagttctgat
ggtcaaatctggagattcctatgcaccccaactggtatcgagcccaaccatattgagcat
gggatgtcaagtacattttctcctggagttgatagtagtcaacttgtgactagtaaggga
taccctaggtcgttgacttggcacacttttaatcattcatcagatgatactacaaggcag
ttccttctacttactaatcatgagatacaatgctttacattgaaactttcagcagagttt
aatgtatcagagctttggtcacatgaaataattgggaccgatggtgatcttggtatccag
aaggaccttgctggccaaaagaaaatttggcctcttgatatggatattgatgctgatggc
aaagtaatcactgttctcgttgctatattctgcaaggatcgggtcaccagttcgagctac
actgagtactctctactgaccatgcaatataagtctggtgttgatattacgaagccgcta
ggtgaaatagtattggagaaaaaagcacctatccaagtgattgtacctaaagcaagagta
gaggatgaggattttttgttcttcatgagactaaaggtaggtggcaagccagctggctct
gctattatactttcaggcgatggtactgcaacggtctcccattactggaggagctcaacc
aaactctatcagtttgacctgcctcatgatgcaggaaaagttcttgatgcttcggttttt
ccttccttggatgacagtgaagatggagcgtgggtagtactcacagagaaagctggagtt
tgggcaatacctgagagggcagttatacttggtggtgttgaaccacctgaaagaagcctg
tcacgtaaaggcagttccaatgctcaatctttgcaggatgagagaagaaactttcctgtt
cctggtaatattgcaccaagaagagctagttcagaagtttgggatgcaggtgacaggcaa
aggccaggcttaacaggagtttcccgccgaagcccacaagatgaggaatcagaaggttta
ctaagtcaacttttccacgagtttctgttatctgggcacgttgatggtgtacttgacaaa
ctgaaaaattcaagggcatttgaannagagggtggaacgaatgtatttaccaggataagt
aaatcaattgttgacacactagctaaacattggacaacaactagaggccctgagattgct
ttatctcttgcgtcagcacagcttgttgagaagcaacaaaagctccaaaagtttcttcag
ttccttgcattatccaagtgccatgaagaattgtgttccaggcaaagagaatctatgcag
attatcatggaacatggagaaaagcttgctggcatgatccaaatgagagaactgcagaat
actattagccatgagagtacatctggacttggatcctcttatagttcagatacccatact
tctggagctctttgggatcttatccagttggttggtcagagagcccgccgaaacacagtt
cttttgatggatagggacaacgctgaagttttctatagcaaggtttcggatcttgaggag
gtatttcattgcttagagaggcagctagagtatattatcagcgaagatatgccggcacct
gttcagttttgcagagtttgtgaactctcaagtgcttgcgtgatgttattccatgcagcc
tttcaatataagagtgaatatcacttgtggtaccctcctcctgaagggttgacgccatgg
tactccaaaactgttgtatggaatgggctatggagtgttgcatcattcatgcttctgttg
ctcaatgaagcaaaccgccttgatggttctgaaaagtttgatttctactcaaaccttgaa
ctactttctgaagtattacttgagtcgtattccaatgctatcacagcaaaagctgaacga
aaggaagatcctaggactctattggaagaatactggacacgcagagatgcccttcttgat
gccctctacaagcaagtgaagagtttcgtggaagccaaactgaaggactcagctgaagaa
aacaaagagcagcataatgatactctaatgacactttcttcaaagttattatcaattgca
aaaagacatgaggcctatcgaactgtgtggagtatatgctgtgaccttgatgattctgaa
ctcctccaaaatctcatgcatgaaagcatggggcctaagggtggtttcagttgctttgtc
ttcaaacaattatatgaaagcaaacaactttcaaagcttatgagactgggtgaggagttt
ccagatgagttagctacatttctgaagcttcatcctgatcttctgtggcttcatgaagtg
tttcttcatcaattttcctcagcttctgagactttgcatgcattatctctttctaaggat
gatagctcagtttccattatgaagggtactgaagcaactggctcaaggcgtcaattaagt
ttggcaagtagaaagcattttctgaatcttgcaaaaatatcggcaatggcagcaagagat
gtgggctatgagctgaaggtcaggcggattgatgcagatctaaacattctacagctacag
gaaaagatattgacgctactacctgatgaagaaaagcaatcaattggtgaaaaacttctt
cctcctatagatctcattgagttgtgtcttagaattcaacatccagagccgtcattgcga
gcctttgatcttttcttatggaccagtgcctcatttcttagaaataatactagcctatta
gaagactgctggaggaatgccgcaaatcaagacaattggggagaactctatcaaaggtcc
ataactgagggatggagcgatgagaggacaattgaggtacttaagaaaaccgttcttttt
caagcctccagcaagtgttatggacctgatgcagaaacttttgatggaattggatttaac
gaagttctccccctgaggctagaaagtcccaacgacccagattccaagtacgcgaattca
tctgtcgaagctgtcctgatgcagcacaaggactatccagaagccggcaagctgatgctg
ttcgcattgatggttgggagcgagtgggatgcttctaacgctcccccatctgtgatggac
tgcgaaggatcttccccaacagagtga
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