Salvia splendens (scarlet sage): 121742067
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Entry
121742067 CDS
T07627
Name
(RefSeq) DDB1- and CUL4-associated factor 13-like
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121742067
04121 Ubiquitin system [BR:
sspl04121
]
121742067
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
90S particles
Other 90S particles
121742067
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
121742067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Sof1
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
NBCH_WD40
ANAPC4_WD40
Beta-prop_SCAP
WD40_RFWD3
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
PROPPIN
Beta-prop_Vps41
VID27
KNTC1_N
Beta-prop_EDC4L
Motif
Other DBs
NCBI-GeneID:
121742067
NCBI-ProteinID:
XP_041991028
LinkDB
All DBs
Position
7:35633428..35638879
Genome browser
AA seq
451 aa
AA seq
DB search
MKVKVISRSTDEFTRERSQDLQRVFRNFDPTLRTQEKAVEYVRALNAAKLDKIFARPFIG
AMDGHIDAVSAMAKNPANLKWLFSGSMDGDIRLWDLATRQTVCQFPGHQGAVRGLTASAD
GRVLVSCGTDSTVRLWNVPLPSHAQDDSSDNEAKPLATYVWKSAFWGVDHQENGELFATA
GAQVDIWNHNRSQPINTFEWGKDTAISVRFNPGEPNVLATSGSDRSITIYDLRLSSPARK
IIMQTKTNSIAWNPMEPMNFTAANEDCNCYSYDVRKMNEARCVHRDHVSAVMDIDYSPTG
REFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKFSNDGSYIISGSDDTNLRLWKA
KASEQLGVLLPRERKNHEYLEAVKNRYKHLPEVKRIVRHRHLPKPIYKAASLRRIMTDAQ
RKKDERRRAHSAPGSIINKPLRKRRIIKEVE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaaagtaatttctcgctctaccgatgaattcacccgagaacgaagtcaggac
cttcagagggtgttccgcaactttgatcctacccttcgaactcaagagaaagcagtcgag
tatgttcgcgctcttaatgcagctaaattagataagatatttgcgcgtcctttcattggg
gctatggatgggcacattgatgcggtctcggcgatggctaagaacccagctaatttgaag
tggcttttttcggggtctatggatggagatattcgtctttgggatttggctactaggcag
acagtatgccagtttcctggtcaccaaggtgctgtacggggtctgacagcatcagcagat
ggtcgtgttcttgtttcatgtgggactgattcgactgtcaggctctggaatgttcctctt
ccttctcacgcccaagatgactcatcggataacgaagccaagccactagcaacctatgtt
tggaaaagtgccttctggggtgttgatcaccaagagaatggggaactttttgccacagct
ggagctcaagtagacatatggaaccacaacaggtctcagccaatcaacacttttgaatgg
ggcaaagatacagctatatctgtgcggtttaatccaggggaaccaaatgtattagcaaca
tcaggcagtgatcgaagcattactatatatgatttacggctgtcttctcctgcaagaaag
attattatgcagacaaaaacaaattccatagcatggaacccaatggagcctatgaacttt
acagctgcaaatgaagattgcaattgctatagttatgatgttcgaaaaatgaatgaggcg
agatgtgtgcacagagatcatgtttctgcagtaatggatattgattattcaccaactggc
cgtgagtttgtaactggatcttatgatagaactgtcagaatattccaatataatggtggc
cacagccgagaaatatatcatactaagagaatgcaaagggtcttttgtgtcaagttcagc
aatgatggaagctacattatctctggtagtgatgacacaaaccttcgactttggaaggcc
aaagcatctgagcaactgggagttctgttgccgagagagcgtaaaaaccatgaatacctg
gaggctgttaagaatcgctacaagcatcttcctgaggtcaagcgcatagtcaggcacagg
cacttgcccaagccaatctataaagcagcttctctgcgtcgcatcatgactgatgcccag
agaaagaaagacgagaggaggagagctcacagcgccccgggcagtatcatcaacaagcca
ttgcgtaaacgaagaatcatcaaagaagttgagtga
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