Salvia splendens (scarlet sage): 121742193
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Entry
121742193 CDS
T07627
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121742193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121742193
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121742193
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
DUF7885
LRR_4
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
121742193
NCBI-ProteinID:
XP_041991196
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Position
7:complement(7169943..7173012)
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AA seq
582 aa
AA seq
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MAYSFPEEVLEHVFSFLSSARDRNTVSLVCKSWYEIERWCRHRIFVGNCYAVSPEIVIRR
FPELRAVEMKGKPHFADFNLVPEGWGAYAYPWIAAMAEAYPFLEEIKLKRMVVTDETLEL
ISKSYKNFKVLVLTSCEGFTTDGLASIAANCRHLRELDLRESEVEDLSGNWLSDFPDSCT
SLVSLNMSCLGSEVSFSALERLVARSPDLRTLRLNRAVPLEKLANLVRHAPQLVELGTGA
YSAEIRSDTFSSLADAFSACKQLKALSGFWDVVPSYLPAVYSVCSGITSLNLSYAAIPSS
DLVKLISQCQNLQRLWVLDYIEDSGLEALAASCKDLQELRVFPSDPFGAEPNVSLTEQGL
VSVSEGCPKLESVLYFCRQMSNAALIAIAKNRPNFIRFRLCIIEPQAADYLTLEPLDTGF
GAIVENCKELRRLSMSGLLTDRVFKYIGTHAKKLEMLSIAFAGESDFGLHHVLSGCDSLR
KLEIRDCPFGDKALLANAEKLETMRSLWMSSCSVSFGACKLLAQKMPRLNVEVIDERGPP
DSRPESCSVERVYVYRTVASRQRLDMPDFVWTLEEDSSMRYS
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactcgttcccggaggaagttcttgagcacgtcttctcgttcctgagctcggcc
agggaccggaacaccgtctccttagtgtgcaagtcgtggtacgagatcgagcggtggtgc
cgccaccgcatcttcgtggggaactgctacgccgtctcgccggagatcgtgatccgccgg
tttcctgagctgagggcggtggagatgaaggggaagccgcatttcgccgacttcaacctc
gtcccggagggatggggcgcctacgcttacccgtggatcgcagccatggcggaggcgtat
ccgttcctggaggagatcaagctgaagcgcatggtggtgacggacgagaccttggagctg
atctccaagtcgtataaaaattttaaagttctggtgctgacgtcatgcgagggtttcacc
accgacggtctcgcgtctattgcggctaattgcaggcatttaagggaactagatttgagg
gagagtgaagtggaggatctgagtgggaattggcttagcgattttcctgatagctgcact
tctctggtgtcacttaacatgtcttgtttgggttcggaggtaagtttctcggcgttggag
agactggttgcacggtcacctgacctgaggactctccggctgaaccgtgctgtacccctt
gagaagcttgctaaccttgtccggcatgccccccaattggttgaattgggaactggtgcc
tattcagctgaaattcgatctgatactttttcaagcctggctgatgcattttcagcctgt
aagcaacttaaagctttgtctggtttttgggatgtggttccttcgtatcttccagctgtg
tattctgtctgttctggaatcacttcactgaatttgagttatgctgccattccaagttct
gatcttgttaagcttattagccaatgccagaatttgcagcggctatgggtcttggactac
attgaagacagtggactagaagctcttgctgcatcttgcaaggacctgcaagaacttagg
gttttcccttccgatccttttggggcagaacctaatgtgtctttgacggaacaagggctt
gtatctgtctctgaaggttgccccaaacttgaatctgttctgtacttttgccgccagatg
tcaaatgctgcattgattgctattgccaagaaccggcctaactttattcgtttccggctc
tgtattattgagcctcaagctgctgactacttaaccctcgaaccacttgatactggtttt
ggagccattgttgagaactgtaaagaattgcgccggctttccatgtccggcctcctcact
gaccgcgtgttcaaatatattggaacccatgcgaagaaattggagatgctttcaatagcc
ttcgctggggagagtgactttggcctccatcacgtgttatctggctgcgacagcctccgg
aaactggagatcagggactgtccatttggtgacaaggctctattagccaatgctgaaaag
ctagagacaatgcgatccctttggatgtcttcttgctccgtgagttttggagcttgtaag
ctgctcgcacagaagatgcctaggctgaacgttgaagtcatagacgagagaggcccaccc
gattcaaggcctgaaagctgctctgttgagagagtgtatgtctaccgcactgttgccagc
aggcaaaggctcgacatgcctgactttgtctggactctggaggaggattcatccatgagg
tattcctaa
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