Salvia splendens (scarlet sage): 121742334
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Entry
121742334 CDS
T07627
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03030
DNA replication
sspl03410
Base excision repair
sspl03420
Nucleotide excision repair
sspl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121742334
03410 Base excision repair
121742334
03420 Nucleotide excision repair
121742334
03430 Mismatch repair
121742334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspl03032
]
121742334
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121742334
DNA replication proteins [BR:
sspl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
121742334
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
121742334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_lid_RFC1
PTCB-BRCT
AAA_22
RCF1-5-like_lid
Rad17
AAA_assoc_2
AAA_30
nSTAND3
BRCT_2
AAA_5
RuvB_N
AAA_19
Zeta_toxin
AAA_18
AAA_16
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
121742334
NCBI-ProteinID:
XP_041991381
LinkDB
All DBs
Position
7:complement(1538247..1545402)
Genome browser
AA seq
987 aa
AA seq
DB search
MSQDIRKWFVKPHGIPAGNGNTLKQEKPLTPEKPPVVQEAKESSSRRKTSKYFAKDAQSV
KDEMEVEEVSEKKAQKGSTGSASEKPPSGKKPRKFQISDDDDDGDDFATPTLRKGLVDAS
PNKKLKTESGKGVARKIADDIDEDDDQTVKSNAKSAGRGRGRGRGAKGSAVTQITVESMD
VDKSDAEEDMDDKDAKPTKPGGRGRGGRGAPAGGRGRGGGGRGGFMNFGERKDPPHKGEK
EIPEGAPDCLNGLTFVISGTLDSLEREEAEDLIKRHGGRCTGSVSKKTNYLLCDEDIGGR
KSEKAKELGTAFLTEDGLFDMIRASNKSKKPVAKVAPSPPKKSPQKPEKSKQTGQTVTNS
DTKGLASISASSKRKNQSTSLPWTEKYRPKVPNDIVGNQSLVKQLHDWLTNWNEQFLDAK
NKGKGKKQNDSGAKKAVLLSGTPGIGKTSSAKLVSQMLGFQTIEVNASDSRGKADGKIER
GIHGSTSNSIKELVNNQSLSLKPGSSQNVKTVLIMDEVDGMSAGDRGGVADLIASIKISK
IPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQVAKRLSLIASSEGLQANEIALEELAE
RTNGDIRMALNHLQYMGLSMSVIKFDDIKQRLQSNSKDEDISPFTAVDKLFGYNGGKLRM
DERIDLSMSDPDLVPLLIQENYINYRPNSGSKDDNGMKRLNFIARAAESIGNGDIINVQI
RRYRQWQLSQAGCIASCITPAALLHGQRETLEQGERNFNRFGGWLGKNSTMGKNNRLLED
LHVHLLASRESNLGRSTLRLDYLTLLSKRLTEPLKKLPKDEAVERVVEFMELYSVGMEDF
DTIVELSKFKGHPSPLDGVLPAVKAALTKAYNKGSSSRIIKTADLITLPGMKKAPKKRVA
AMLEPVDESLPENAENEEENLSDAEDQEDDLADPEKQQKLQSELQSLNSKAIKVQMELKG
SASSSSKKAPAGRGGGRGSGSASKRKR
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagatataagaaagtggtttgtgaagccacatggtatacccgcaggaaatggc
aacacattgaagcaagaaaagccattgacacctgagaagcctcctgttgtacaagaagca
aaagaatcttccagtaggaggaaaacaagcaaatattttgctaaggatgcacagagtgta
aaagatgagatggaggttgaggaagtttctgaaaagaaggcacagaagggcagtacgggg
tcagcaagcgagaagcctccatcagggaaaaaaccgcgcaaatttcaaatcagtgatgac
gatgatgacggtgatgattttgccacacctaccttaaggaagggtttagtagacgccagt
ccaaacaagaagttgaaaactgaatcaggtaaaggtgttgctcgaaaaatcgctgatgac
attgatgaagatgatgatcaaacagtaaagtccaatgcaaaatctgctggaaggggtagg
ggtcggggtaggggtgcaaaaggttctgcagtcacccaaatcactgtagaaagcatggat
gttgataagagtgatgcagaagaggacatggatgataaagatgctaaacctacaaaacct
ggtgggcgaggccgtggtggaagaggtgcaccagcaggcggaagaggtagaggtggtgga
ggaaggggtggatttatgaactttggtgagaggaaagatcctcctcataaaggagagaag
gaaattcccgaaggtgctccagactgtttaaatggtttgacttttgtgattagtggaaca
cttgacagtttagaaagagaagaagctgaggatctgatcaaacgccatggcggacgttgc
actggatctgtcagcaaaaaaacgaattatcttctatgtgatgaagatattggtggacgg
aagtctgagaaggccaaagagcttggtactgcttttctcacggaggatggtttgtttgat
atgattcgagcatcaaataaatcaaagaagccagtagctaaagttgctccatctcctccc
aagaagagccctcaaaagcctgaaaaaagtaaacaaacaggccaaactgtgacaaactca
gacacaaaaggattggcctctatttcagcatcatctaagcgtaaaaaccaatctacttcc
ctaccatggacagaaaaatataggccgaaggttcctaatgatattgttgggaatcagtct
cttgtaaaacagctccatgattggttgacaaactggaatgaacaattccttgatgccaag
aacaagggaaaaggaaagaaacagaacgattctggtgctaagaaagctgtgcttttgagt
gggacgcctggtattgggaaaactagctcagcaaagttggttagtcagatgcttggattt
caaacaattgaggttaatgctagtgacagtcgtgggaaagctgatggtaaaattgagaga
ggaattcatggaagcacttctaactctatcaaagaacttgttaacaatcaatccctgagt
cttaaaccgggaagctctcaaaatgtgaagactgttctcatcatggatgaggttgatggt
atgtctgctggagatagagggggggttgctgatcttattgccagcatcaaaatctcaaaa
attcccataatatgcatctgtaatgatcgctacagccagaaacttaagagccttgtgaac
tactgcttgctgcttagctttcggaagccaacaaagcagcaggttgctaaaagattatca
cttatagcaagttcagaaggtcttcaagctaatgagattgcactcgaggaacttgctgaa
agaactaatggagatatacgcatggccctcaaccatctgcagtatatgggtctctctatg
tctgtcattaaattcgatgacatcaaacaacgccttcaaagcaattcaaaggatgaagat
atatccccattcacggcggttgataaactgtttggatataatggtgggaagctgcgaatg
gatgagagaatcgaccttagcatgagtgatcctgatctggttcctcttcttatccaggag
aactatatcaattataggccaaattctggcagtaaagatgacaatggtatgaaaaggctg
aacttcattgctcgggctgcagagtccattgggaatggtgatattattaatgtccagata
cggaggtaccggcagtggcaactctctcaggctggttgtattgcatcttgcatcactcct
gcagccctattgcatggacaaagagagacacttgagcagggggaacgcaatttcaataga
tttggtggatggttagggaagaattctactatggggaagaataacagacttttggaggac
cttcatgttcatcttcttgcttctcgcgaatcaaacttaggaaggtcaacattgcgactt
gactacctaacacttctttcgaaacggctgactgaacctttaaagaagctacccaaggat
gaagctgttgagagagttgtcgagttcatggagttgtactcagttggcatggaagatttt
gatacaatcgtggagctttctaaatttaaggggcatccgagtccattggatggtgtactg
cctgctgtaaaagctgccctgacaaaggcttacaataaaggcagttcatcacgtattatt
aagactgctgatttaatcacactccccgggatgaaaaaggcaccaaagaaacgcgtcgca
gcaatgctggaacccgttgatgaatctttaccagaaaacgctgaaaatgaagaagaaaac
ctctcagatgctgaggaccaagaggatgacttggctgatccagagaagcagcagaagcta
caatcagaactgcagtctctaaattcaaaagccattaaagtgcaaatggagttaaagggt
tctgcaagttcaagcagcaaaaaggcgcctgcaggtagagggggcggtcggggctctgga
tctgcctccaagagaaagagatga
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