KEGG   Salvia splendens (scarlet sage): 121742334
Entry
121742334         CDS       T07627                                 
Name
(RefSeq) replication factor C subunit 1
  KO
K10754  replication factor C subunit 1
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03030  DNA replication
sspl03410  Base excision repair
sspl03420  Nucleotide excision repair
sspl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    121742334
   03410 Base excision repair
    121742334
   03420 Nucleotide excision repair
    121742334
   03430 Mismatch repair
    121742334
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sspl03032]
    121742334
   03400 DNA repair and recombination proteins [BR:sspl03400]
    121742334
DNA replication proteins [BR:sspl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    121742334
DNA repair and recombination proteins [BR:sspl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     121742334
SSDB
Motif
Pfam: RFC1 BRCT AAA AAA_lid_RFC1 PTCB-BRCT AAA_22 RCF1-5-like_lid Rad17 AAA_assoc_2 AAA_30 nSTAND3 BRCT_2 AAA_5 RuvB_N AAA_19 Zeta_toxin AAA_18 AAA_16 RsgA_GTPase
Other DBs
NCBI-GeneID: 121742334
NCBI-ProteinID: XP_041991381
LinkDB
Position
7:complement(1538247..1545402)
AA seq 987 aa
MSQDIRKWFVKPHGIPAGNGNTLKQEKPLTPEKPPVVQEAKESSSRRKTSKYFAKDAQSV
KDEMEVEEVSEKKAQKGSTGSASEKPPSGKKPRKFQISDDDDDGDDFATPTLRKGLVDAS
PNKKLKTESGKGVARKIADDIDEDDDQTVKSNAKSAGRGRGRGRGAKGSAVTQITVESMD
VDKSDAEEDMDDKDAKPTKPGGRGRGGRGAPAGGRGRGGGGRGGFMNFGERKDPPHKGEK
EIPEGAPDCLNGLTFVISGTLDSLEREEAEDLIKRHGGRCTGSVSKKTNYLLCDEDIGGR
KSEKAKELGTAFLTEDGLFDMIRASNKSKKPVAKVAPSPPKKSPQKPEKSKQTGQTVTNS
DTKGLASISASSKRKNQSTSLPWTEKYRPKVPNDIVGNQSLVKQLHDWLTNWNEQFLDAK
NKGKGKKQNDSGAKKAVLLSGTPGIGKTSSAKLVSQMLGFQTIEVNASDSRGKADGKIER
GIHGSTSNSIKELVNNQSLSLKPGSSQNVKTVLIMDEVDGMSAGDRGGVADLIASIKISK
IPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQVAKRLSLIASSEGLQANEIALEELAE
RTNGDIRMALNHLQYMGLSMSVIKFDDIKQRLQSNSKDEDISPFTAVDKLFGYNGGKLRM
DERIDLSMSDPDLVPLLIQENYINYRPNSGSKDDNGMKRLNFIARAAESIGNGDIINVQI
RRYRQWQLSQAGCIASCITPAALLHGQRETLEQGERNFNRFGGWLGKNSTMGKNNRLLED
LHVHLLASRESNLGRSTLRLDYLTLLSKRLTEPLKKLPKDEAVERVVEFMELYSVGMEDF
DTIVELSKFKGHPSPLDGVLPAVKAALTKAYNKGSSSRIIKTADLITLPGMKKAPKKRVA
AMLEPVDESLPENAENEEENLSDAEDQEDDLADPEKQQKLQSELQSLNSKAIKVQMELKG
SASSSSKKAPAGRGGGRGSGSASKRKR
NT seq 2964 nt   +upstreamnt  +downstreamnt
atgtctcaagatataagaaagtggtttgtgaagccacatggtatacccgcaggaaatggc
aacacattgaagcaagaaaagccattgacacctgagaagcctcctgttgtacaagaagca
aaagaatcttccagtaggaggaaaacaagcaaatattttgctaaggatgcacagagtgta
aaagatgagatggaggttgaggaagtttctgaaaagaaggcacagaagggcagtacgggg
tcagcaagcgagaagcctccatcagggaaaaaaccgcgcaaatttcaaatcagtgatgac
gatgatgacggtgatgattttgccacacctaccttaaggaagggtttagtagacgccagt
ccaaacaagaagttgaaaactgaatcaggtaaaggtgttgctcgaaaaatcgctgatgac
attgatgaagatgatgatcaaacagtaaagtccaatgcaaaatctgctggaaggggtagg
ggtcggggtaggggtgcaaaaggttctgcagtcacccaaatcactgtagaaagcatggat
gttgataagagtgatgcagaagaggacatggatgataaagatgctaaacctacaaaacct
ggtgggcgaggccgtggtggaagaggtgcaccagcaggcggaagaggtagaggtggtgga
ggaaggggtggatttatgaactttggtgagaggaaagatcctcctcataaaggagagaag
gaaattcccgaaggtgctccagactgtttaaatggtttgacttttgtgattagtggaaca
cttgacagtttagaaagagaagaagctgaggatctgatcaaacgccatggcggacgttgc
actggatctgtcagcaaaaaaacgaattatcttctatgtgatgaagatattggtggacgg
aagtctgagaaggccaaagagcttggtactgcttttctcacggaggatggtttgtttgat
atgattcgagcatcaaataaatcaaagaagccagtagctaaagttgctccatctcctccc
aagaagagccctcaaaagcctgaaaaaagtaaacaaacaggccaaactgtgacaaactca
gacacaaaaggattggcctctatttcagcatcatctaagcgtaaaaaccaatctacttcc
ctaccatggacagaaaaatataggccgaaggttcctaatgatattgttgggaatcagtct
cttgtaaaacagctccatgattggttgacaaactggaatgaacaattccttgatgccaag
aacaagggaaaaggaaagaaacagaacgattctggtgctaagaaagctgtgcttttgagt
gggacgcctggtattgggaaaactagctcagcaaagttggttagtcagatgcttggattt
caaacaattgaggttaatgctagtgacagtcgtgggaaagctgatggtaaaattgagaga
ggaattcatggaagcacttctaactctatcaaagaacttgttaacaatcaatccctgagt
cttaaaccgggaagctctcaaaatgtgaagactgttctcatcatggatgaggttgatggt
atgtctgctggagatagagggggggttgctgatcttattgccagcatcaaaatctcaaaa
attcccataatatgcatctgtaatgatcgctacagccagaaacttaagagccttgtgaac
tactgcttgctgcttagctttcggaagccaacaaagcagcaggttgctaaaagattatca
cttatagcaagttcagaaggtcttcaagctaatgagattgcactcgaggaacttgctgaa
agaactaatggagatatacgcatggccctcaaccatctgcagtatatgggtctctctatg
tctgtcattaaattcgatgacatcaaacaacgccttcaaagcaattcaaaggatgaagat
atatccccattcacggcggttgataaactgtttggatataatggtgggaagctgcgaatg
gatgagagaatcgaccttagcatgagtgatcctgatctggttcctcttcttatccaggag
aactatatcaattataggccaaattctggcagtaaagatgacaatggtatgaaaaggctg
aacttcattgctcgggctgcagagtccattgggaatggtgatattattaatgtccagata
cggaggtaccggcagtggcaactctctcaggctggttgtattgcatcttgcatcactcct
gcagccctattgcatggacaaagagagacacttgagcagggggaacgcaatttcaataga
tttggtggatggttagggaagaattctactatggggaagaataacagacttttggaggac
cttcatgttcatcttcttgcttctcgcgaatcaaacttaggaaggtcaacattgcgactt
gactacctaacacttctttcgaaacggctgactgaacctttaaagaagctacccaaggat
gaagctgttgagagagttgtcgagttcatggagttgtactcagttggcatggaagatttt
gatacaatcgtggagctttctaaatttaaggggcatccgagtccattggatggtgtactg
cctgctgtaaaagctgccctgacaaaggcttacaataaaggcagttcatcacgtattatt
aagactgctgatttaatcacactccccgggatgaaaaaggcaccaaagaaacgcgtcgca
gcaatgctggaacccgttgatgaatctttaccagaaaacgctgaaaatgaagaagaaaac
ctctcagatgctgaggaccaagaggatgacttggctgatccagagaagcagcagaagcta
caatcagaactgcagtctctaaattcaaaagccattaaagtgcaaatggagttaaagggt
tctgcaagttcaagcagcaaaaaggcgcctgcaggtagagggggcggtcggggctctgga
tctgcctccaagagaaagagatga

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