Salvia splendens (scarlet sage): 121742423
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Entry
121742423 CDS
T07627
Name
(RefSeq) protein GAMETOPHYTE DEFECTIVE 1-like
KO
K03539
ribonuclease P/MRP protein subunit RPP1 [EC:
3.1.26.5
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121742423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121742423
03016 Transfer RNA biogenesis [BR:
sspl03016
]
121742423
03029 Mitochondrial biogenesis [BR:
sspl03029
]
121742423
Enzymes [BR:
sspl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
121742423
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
121742423
Transfer RNA biogenesis [BR:
sspl03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
121742423
Mitochondrial biogenesis [BR:
sspl03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
121742423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_P_p30
Motif
Other DBs
NCBI-GeneID:
121742423
NCBI-ProteinID:
XP_041991491
LinkDB
All DBs
Position
7:complement(8612012..8615762)
Genome browser
AA seq
699 aa
AA seq
DB search
MGFFDLNISYRESDRHAVDKPSLRGRRLKLALKAMELGYTGVAYNRTLTGVMSESDRCSI
VLFPISTLTPSSSSFFASVKFHRDILHVAGAAPFRQYTRLTVVVANSAQALALNSGNPVL
RSYDIVSVRPTRQDAFDQACQNSEVDMISIDFSKMDSFSFRLRQPMIKAAIKRGLYFEIT
YSDLIGDAESKRKMISNCKLLVDWTRGKNLIICSDASSASELRGPQDVANLFFLLGLSRE
RAKAALSSNCRSLLANAIRKKHFYKEAVKVEEIPSGGQSHTSKSVFDDWLKWDPISSGQG
AVLFEDMEKSFSISKTVKESVKTINFTSNLNGLPAHGFQIKDLVYANKASLEPCDVDKRA
LPVVETEGGASDKKLEKQVAKTLHEQHHSLLKNEDGPGNLNNEPEGVVELPEGQTSPSGN
IYANSYCQDSEVQLGYVPDAKLALPPLLGRDQVSVDVAQGEYQISGSGDSSTLSFPTFSV
NSADSEEIIKTSNDLEHNTVASETQIKDPPSPVQQGNFLHSGGQVHITKSNTLAIDNHVT
VELSNPLNKSSSSIFPLDPGTENLLEMGACANEGNRMDEIHNKSAIETTQEYPLASPHTS
YEDGYGEGGQCSKITDGSIKFGVGSLLEGSSNMITNFDEPTNDDVMVELKPIDFVPDCQG
FAKSRAGINKRKRKSPHQPFLFPFKRYMKSKPSKKKPRK
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgggattcttcgacttgaacatatcttaccgggaatccgaccgccatgccgtcgacaaa
ccctccctgagaggccgccgcttgaagctcgccctgaaagccatggaactcggctacacc
ggcgtcgcctacaatcgcaccctcacaggcgtcatgtccgaatccgaccgctgttccatc
gttctcttccccatctccacactcaccccctcctcctcttcgttcttcgcctccgtcaag
ttccaccgcgacattctacacgtcgccggtgcagcccccttccgccagtacacccgcctt
accgtcgtcgtcgctaattccgcccaggctttggctcttaattccggtaaccctgtgctg
cgaagctatgacatcgtctccgttaggcctactagacaagatgcatttgatcaggcttgt
caaaattcggaggttgatatgatctctattgatttctcgaagatggactcattcagcttc
aggctaaggcagccgatgatcaaagctgcaattaagcgagggttgtactttgagatcaca
tactctgatctgattggtgatgcagaatcaaaacgaaaaatgatatccaattgcaagctt
cttgttgattggactcgagggaaaaatttaattatatgtagtgatgcctcttctgcctct
gaacttagagggcctcaagatgtagcaaatttgttctttttgctgggactctctagagaa
cgtgctaaagcagctctctcctcaaactgtagatctctcctagctaatgcaataaggaaa
aaacatttttacaaagaggctgttaaagttgaagagataccatctggtggacaatcccat
acatcaaaatctgtgtttgatgattggctcaaatgggatcctatttctagtggccagggt
gctgtgctatttgaagacatggagaagtctttttctatttcgaaaactgtaaaagaaagt
gtgaaaaccatcaacttcacctcaaatttgaatggcctgcctgcacatggtttccagatc
aaagatctggtatatgcgaataaggcatctttggagccgtgtgatgtggataaacgtgct
cttcctgtcgttgagactgaggggggtgcttcagataaaaagcttgaaaagcaggttgct
aaaactttgcatgaacaacaccacagcctgcttaaaaatgaagatggtcctggtaacttg
aataatgaacccgagggggttgttgaactgcctgaaggtcaaacgtcaccatctggaaat
atttatgctaactcgtactgtcaagattcagaagttcaattgggttatgttccggatgca
aaacttgcgcttccacctcttctaggacgtgatcaagtttccgttgatgttgcacaggga
gaatatcagatttcaggttcgggagattcgtcaacgttgtcttttcccactttcagtgtt
aattccgcagattctgaagaaattataaagacttcaaatgacttggaacacaatactgtt
gcatctgaaacccaaataaaagatcccccatcccctgtccagcaaggaaactttttacat
agtggtggacaagttcatatcacaaagagcaatacgttagctattgacaaccatgttact
gtagaactttccaatcccttgaataaatctagttcctctatctttccattagaccctggt
acggaaaatctattagaaatgggtgcatgtgcaaatgaaggtaacagaatggatgaaatt
cacaacaaaagtgccattgaaactacgcaagagtatcccttggcatcacctcacacctcc
tatgaagatggttatggtgaaggagggcagtgtagtaaaattactgatggttctattaag
tttggtgttgggtcgcttctagaggggtcttcaaatatgataacaaattttgatgagcca
acaaatgatgacgtgatggtcgagttgaagccaatagattttgtccctgattgtcaaggc
tttgctaaatctcgtgcaggaataaataaaagaaaaagaaagtcgcctcatcaacctttc
ttgtttccattcaagcgttatatgaaatccaagccttccaagaagaagccccgaaagtaa
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