Salvia splendens (scarlet sage): 121742701
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Entry
121742701 CDS
T07627
Name
(RefSeq) zinc finger CCCH domain-containing protein 24-like
KO
K15332
tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sspl03016
]
121742701
Transfer RNA biogenesis [BR:
sspl03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
121742701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
zf-CCCH
Methyltransf_25
RRM_1
Methyltransf_4
MTS
Ubie_methyltran
Methyltransf_11
Methyltransf_15
PCMT
Methyltransf_32
Lectin_N
Cons_hypoth95
PrmA
Methyltransf_12
Ish1
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
121742701
NCBI-ProteinID:
XP_041991864
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Position
7:complement(7994638..7999789)
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AA seq
809 aa
AA seq
DB search
MAEIPPTETLTSVEHQDSTDQPNPSVSPLPPSAEEINLPEKRKREVEPEPEPSADKAKHP
LWKTSLCSYFRRSGELCSHGETCRYAHGEDELRPRPDNTWDPTSERAKKMAKTNDQDKAP
EEGGIMMTEALEEDGEESSSGLSKCIVNLPMKWSSDNFRLFLNDQGIVFKSAKKKKGMIV
GFVTFESEEQSKTAVEKLDGQTVGNNRTLKVSDVIQRPFENNNKAALPEKPSPDNDDEND
SVLPSDSASKARSARDAVTPLAHMSYSDQLEHKKNSLAQILKRLTRNARKACPNGISLPE
WILKAREIGGLPCKLEGIIESPLVNGYRNKCEFSVGNSLQGKHTVGFLLGNFREGVTAVE
EPVNCPNVSRIACKYAAIFQEFLQQSCLPIWNRLNNSGFWRQLTVREGRKPGQIDADNSE
ASISEVMLMVQVCTLGSDEGQVKEELHRLAQTFSAGSTAESPPLPLTTLVIQDHTGISNA
APSDAPLRYNFLHRGGDSGLEIADDVVEPRIHDHISNLRFSISPSAFFQVNTLAAERLYS
LAGDWADLGPDTLLFDVCCGTGTIGLTLAHRVGMVVGIEMNASAVSDAERNAEANGIKNC
RFVCGKAEDVIGSLMKEYLSLPEKKDENRETSENNESGVNSAKENINSVDGVVGAENSTV
VNHENGHAMSGCSEDEAKLEKDSTSQSSSNPMRQYKNVVAIVDPPRVGLHPTVIKVLRTQ
SRLRRLVYISCNPDSLVANAIELCTPSPDKSEKGNNKNNRGWRNMSAAGLARHRSKSMPE
SEPFKPMKAMAVDLFPHTPHCELVMLLER
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaatcccgccaactgaaaccctaacctcagtggagcaccaggattccaccgac
cagcccaatccgtcggttagccctctgcctccatccgccgaagaaatcaaccttccagag
aagcgcaagcgtgaggttgagcccgaaccggaaccctcagccgacaaggcgaagcacccg
ctgtggaagacgagcctatgctcctacttcaggaggtctggcgaattgtgcagccacggc
gagacttgccgctacgctcacggggaggacgaactccggccgcgccccgacaacacttgg
gatcccacttcggagcgggctaaaaagatggccaaaactaatgaccaggataaagcgcct
gaggagggcggcataatgatgacggaggcgttggaggaggacggggaggagtcttcttct
ggtttatccaaatgtattgtcaatttgcctatgaagtggagttcggataattttaggctt
tttctgaacgaccagggtatcgtgttcaaatcggcaaagaaaaagaaaggaatgatagtt
ggttttgttactttcgaaagtgaagaacaatctaagactgctgtggagaagctggatggg
caaactgttggaaataatagaacattaaaggtctcggatgtcattcagagaccgtttgag
aacaacaataaagctgcattgcctgaaaagccatctcccgataatgatgatgagaatgac
agtgtacttcctagcgattcagcctccaaggctagaagtgcccgtgatgctgtgactcct
cttgctcacatgtcctattctgatcagctcgagcacaagaaaaactctttggcacaaatc
ctcaaaagactaactcgaaatgcacgcaaggcatgtccaaatggtatttcacttccagaa
tggatcctgaaggctagagaaataggtggtcttccatgcaaattagagggtataatcgaa
tcaccccttgttaatggataccgtaacaagtgtgaattctctgttggaaattctttgcaa
gggaagcacacagtgggctttttacttgggaatttcagggaaggtgtgacagctgttgag
gaacccgttaactgcccaaatgtttctagaattgcttgtaaatatgctgctatctttcaa
gaatttctgcagcagtcctgcttgcccatatggaacagattgaacaatagcgggttctgg
cgtcaacttacggtccgagagggtagaaaacctggccagattgatgctgacaattccgag
gctagtatttcagaggtcatgctcatggttcaggtgtgcaccctgggttctgatgaaggg
caggtaaaagaggaacttcatcggttagcacaaactttttctgcaggatctactgcagaa
tctcctccattacctttaacaacactagtaattcaggatcatacaggaatatcaaatgct
gcaccatctgatgcccctttgcggtacaattttcttcatagagggggtgatagtggactg
gagatagctgatgatgtcgtagaaccgagaattcatgatcacataagcaatctccggttc
tctatatctccgtctgccttctttcaggttaacacccttgcagcagagaggttgtattca
cttgctggggactgggctgacctgggtcctgacactttactctttgatgtttgttgcggg
actggaactattggtctgactttagctcaccgtgttggcatggtcgtcggtattgaaatg
aatgcttctgcagtttcagatgcagaaagaaatgcagaagccaatggcattaaaaactgc
agatttgtctgtggaaaggctgaggatgttattgggtcgttgatgaaagagtatctatct
ttgcctgaaaagaaagacgaaaacagagagacatcagaaaataatgagtctggagtcaat
tctgccaaagaaaatataaactctgttgatggtgtggttggagctgaaaatagcactgtt
gttaaccatgagaatggtcatgctatgagtgggtgttcagaagacgaggctaagttggag
aaggattccacttcacaaagtagtagcaacccaatgcgacaatataaaaatgtcgttgct
atagtggatcctccacgtgtcggacttcatcccactgtaatcaaagttttgaggacacag
tcgcgtttaaggaggctcgtctacatctcctgcaatcctgatagtctggtggcaaatgct
atcgagctctgcacgccttcacccgataaatccgagaaaggaaataataagaataatcgg
ggatggagaaatatgagcgcagctggtctagcccgtcacagatccaaatctatgcctgag
tccgagccattcaaacccatgaaagcgatggccgtcgatcttttccctcatacaccccac
tgcgagctggtgatgctgcttgagaggtga
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