Salvia splendens (scarlet sage): 121742703 Help Entry 121742703         CDS       T07627                                  Name (RefSeq) DNA ligase 1-like   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism sspl  Salvia splendens (scarlet sage) Pathway sspl03030   DNA replication sspl03410   Base excision repair sspl03420   Nucleotide excision repair sspl03430   Mismatch repair Brite KEGG Orthology (KO) [BR:sspl00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     121742703    03410 Base excision repair     121742703    03420 Nucleotide excision repair     121742703    03430 Mismatch repair     121742703  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:sspl03032]     121742703    03400 DNA repair and recombination proteins [BR:sspl03400]     121742703 Enzymes [BR:sspl01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      121742703     6.5.1.6  DNA ligase (ATP or NAD+)      121742703     6.5.1.7  DNA ligase (ATP, ADP or GTP)      121742703 DNA replication proteins [BR:sspl03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     121742703  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      121742703 DNA repair and recombination proteins [BR:sspl03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      121742703    NER (nucleotide excision repair)     Other NER factors      121742703    MMR (mismatch excision repair)     Other MMR factors      121742703 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase CBS Motif Other DBs NCBI-GeneID:  121742703 NCBI-ProteinID:  XP_041991868 LinkDB All DBs Position 7:complement(5249076..5257670) Genome browser AA seq 796 aa AA seqDB search MFSFCSCRHTSLLVSLSLNVATKLTSRSPVSISSKHFFNSTTLNPSARTMSGSSRSAFDV LMANASKKKNQPSKAKESSPRKRKSPSKPQSQTPDLLPQKEDTPAPTENQDVVQNSRSCE IGGLKDSGSNQIQTSSNADKGLVVAKKPKLSITPEESVSELKKKAVEFKAKKAAYWGEGK RVPFMFLAKTLEAVSKESGRIVITGIVCNMLRTVMETAPDDLLAVMYLLVNRIAPAHEGL ELGIGESSIIKALAEACGAKEAHIKKQYEELGDLGLVAKAIRTSQPLLRKPEPLTVVKVF DTFRLIAKESGKDSQEKKKNLIKALLVATTDCEPQFLIRLLQTKLRIGLAEQTLLAALGH AAVYSEKHSVSAKADHSLEEAAKIIKQVYSVIPVYDKIIPALLCGGVWDLHKTCSFSPGI PVGPMLAKPTKGVSEIVEKFQGMEYTCEYKYDGERAQIHYMENGSVEIYSRNAERNTGKF PDVVAAITRLKKPSVKSFVLDCELVAYDREKQKILPFQILSTRARKNVVMNEIKVNVCIY AFDILYLDGQLLLQEQLNVRREHLYKSFQEEPGFFQFATAITSDDLEEIQKFLDDAVNSS SEGLIIKTLKKDATYEPSKRSLNWLKLKKDYMDTIGDSLDLVPIAAFHGRGKRTGVYGAF LLACYDNDKEEFQSICKIGTGFSEAMLEERSSSLRSKVIEKPKSYYRYGDTLSPDVWFEP SEVWEVKAADLTISPVHRAAVGTVDPDKGISLRFPRLLRVREDKNPEQASSSDMVADMYN AQKHTQKDNQYENDDV NT seq 2391 nt NT seq  +upstreamnt  +downstreamnt atgttctcgttctgctcatgccgccacacctcactcctcgtatctctctctcttaacgtc gccacaaaactcacctcccgatcccctgtctccatctcctctaagcatttctttaattcc accacactaaaccctagtgcacgaacaatgtctggctcttcccgctcagcttttgatgtt ctcatggccaatgcttccaagaagaaaaatcaaccgtccaaggctaaagaatcatcacca cggaaacgtaaaagcccatctaaaccccaatcccaaacccctgatttacttccacaaaag gaagacacaccagcacccactgaaaatcaagatgttgtgcagaattcgcgctcgtgtgaa atcggtgggttgaaagattcaggttcaaatcaaattcagactagtagtaatgcggataaa ggcttggtggttgcgaagaagccgaagttgtcaattacgccagaggagagtgtatcggag ttgaagaaaaaggctgtagaattcaaagcgaagaaggcggcgtattggggtgaaggaaaa cgggtgcctttcatgtttttagcaaagacgttggaggctgtctctaaggagtcaggcagg attgttatcacaggcatcgtgtgtaatatgctgaggacagtgatggagacagcgccggat gatctcttggcggttatgtaccttttggtgaataggatcgcacctgctcatgagggtttg gagcttggtattggggaatcttcgattatcaaggcacttgctgaggcttgtggggctaaa gaagcacatattaagaagcaatacgaggaacttggtgatctaggccttgtagcaaaagcc atacgtacgtcgcagcctttgttgcgtaaaccagaaccgttaaccgttgttaaagtcttt gacacatttaggctgattgccaaggaatctgggaaagatagtcaagagaagaaaaagaat ctcataaaggcattactagttgcaacaactgattgcgaacctcaatttttgattcgtttg ctccagacaaaattacgtattggtttggcagaacaaactctattggctgcattagggcat gctgctgtatattcagagaagcattcagtttctgcgaaggctgatcattcgctcgaagaa gctgcaaaaatcatcaaacaagtttattctgtaattccagtatacgataaaatcattccg gctcttctttgtggtggtgtgtgggatctacacaagacatgtagcttttcacccggtatt cctgtcggacccatgttagctaaacctacaaaaggagtatctgaaattgtggaaaagttt caaggtatggaatacacctgcgaatacaagtatgatggagaacgtgctcagatacactat atggagaatggctcagtagagatatacagtagaaatgcagagcggaacactggaaagttt ccagatgttgttgctgctatcactagattgaaaaagccttctgtaaaatcatttgttctt gactgcgaacttgttgcatacgatcgcgaaaaacagaaaatcctacctttccagatactc agcactcgtgctcggaaaaatgttgtcatgaatgaaatcaaagtcaatgtttgcatatat gctttcgacattctctatcttgatggccaactactcctgcaggagcaactgaatgttcgt agagagcacctttacaaatcatttcaagaagaacctggttttttccagtttgctactgct ataacatcagatgatcttgaggaaatacaaaagtttctagatgatgctgttaattcaagc tctgaggggttgattatcaaaacattgaaaaaagatgctacgtatgaaccttcaaaaagg tcacttaactggctaaaactgaagaaagactacatggacactattggtgattcattagat ttggtccccattgctgcattccatggcaggggtaaacgtactggtgtctacggtgccttt ctccttgcatgttatgacaatgacaaagaagaattccaaagcatatgtaaaatcggaact ggattttctgaagctatgcttgaagaacgttcttctagtcttcgctcaaaagttattgag aagccaaagtcatattacaggtatggagatacacttagtccggatgtgtggtttgaacct agtgaggtttgggaggtcaaagcggctgatcttaccattagccccgttcaccgagctgcc gttggcaccgtagatcccgacaagggaatttctctgaggtttccacgtttacttcgtgtg cgagaagataagaatccagaacaggcctcctcatctgatatggttgctgatatgtacaac gcacagaagcacacccagaaagacaaccaatatgaaaatgatgatgtttga

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