Salvia splendens (scarlet sage): 121742726
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Entry
121742726 CDS
T07627
Name
(RefSeq) U1 small nuclear ribonucleoprotein A-like
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121742726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121742726
Spliceosome [BR:
sspl03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
121742726
Complex B
121742726
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
xRRM
DUF4523
RRM_10
RRM_YTH1
CR_prot_dom_plant
Motif
Other DBs
NCBI-GeneID:
121742726
NCBI-ProteinID:
XP_041991897
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All DBs
Position
7:6724545..6728007
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AA seq
251 aa
AA seq
DB search
MEEAPPAPAPPPPPAASETAVNQTIYINNLNEKIKLDELKKSLHAVFSQFGKILEVLAFK
TLKHKGQAWVVFDEVSSASNALRQMQGFPFYDKPMRIQYAKSKSDVIAKADGTFVPREKR
KKSDDRGRKKKDQHDGNQAAAGQNPAYIGAYGAAPPLSQIPFMGARAAPDGPAPPNNILF
IQNLPHQTTSVMLQMLFSQCPGFKEVRMIEAKPGIAFVEYENEMQATVAMQGLQGFKITD
DHPMLVSYAKK
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcaccaccagcccccgctccccctccccctccagccgcctcggaaactgct
gtgaatcagacgatttacattaacaatctcaacgagaaaattaagctcgacgaattgaag
aaatcgctgcacgcggtgttttcgcagttcgggaaaatactggaggttctggcgttcaaa
accctaaagcataaggggcaagcatgggttgtttttgacgaggtctcttccgcctccaat
gcgcttcgtcaaatgcaggggtttccgttctacgacaagccaatgcggatacaatatgcg
aagtcaaaatctgatgtcatagcaaaggcagatggcacttttgtccctcgagaaaaaaga
aagaagagtgatgacagaggaagaaagaagaaggatcagcatgatgggaaccaagcagca
gcgggtcaaaatcccgcatatattggtgcttatggtgcagcccctcctttatcccagatc
ccatttatgggtgctagagctgctccagatggccctgctcctccaaataacatcttgttc
attcaaaatctcccccaccaaacaacttcagtgatgctgcaaatgctcttcagtcagtgt
cctgggtttaaggaagttaggatgatcgaagctaaacctggaattgctttcgtagaatac
gaaaatgagatgcaggcaacggttgcaatgcaggggcttcagggatttaaaataactgat
gaccatcctatgttggttagctatgcaaagaaatag
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