Salvia splendens (scarlet sage): 121742892
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Entry
121742892 CDS
T07627
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121742892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121742892
Spliceosome [BR:
sspl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
121742892
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
121742892
NCBI-ProteinID:
XP_041991941
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Position
8:28680251..28685331
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AA seq
547 aa
AA seq
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MKTAREESEDAANAEGVAKRQKLDQSPQQLAFENPLLPLASYDDDEEEVRERSDRDRATD
VNDGKLEGINALIEDEYDDEDDEESRAEQGRRSRSIEVRRDCPYLDTVNRQVLDFDFEKF
CSVSLSNLNVYACLVCGKYFQGRGPKSHAYTHSLEAGHHVYINLCTEKVYCLPDGYEVID
PSLDDIRHVLNPRFSRENVIQIDQNRQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSL
MRVTPLRNFFLIPDNYAHCKSQLVHRFGELTQKIWHARNFKGQVSPHEFLQAVMKASGKT
YRIGAQSDPVRFISWLLQTLHRDLRRSKNGSSIIHQCFQGELEVVKEIHSKHIGEKKENG
DNGNDAGNVILETSKMPFLMLGLDLPPPPLFKDIMEKNIIPQVPLFNILKKFDGETVTEV
VRPDTARMRYRVTKLPQYLILHMLRFTRNNFFVEKNPTLVNFPVKNLELKDYIPLPVPKD
KEKLRSKYDLIANIVHDGKPGGGSYRVFVQRKSEELWYEMQDLHVSETLPQMVALSEAYM
QIYEQQQ
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagcacgagaagaatccgaggatgcagctaacgcagagggcgtggcgaagagg
cagaaactcgatcaatctccgcagcagcttgctttcgaaaacccgctccttccgcttgct
tcttacgacgatgatgaagaagaagtgagagagaggagcgatagagatagggctacagat
gtaaatgatggcaaattggaaggtataaacgcgcttattgaagatgaatatgatgatgaa
gacgatgaagaaagtagggcagagcagggacggcgcagtcggtcgattgaagtaagaaga
gactgcccgtatctcgatactgttaatagacaggttttagattttgatttcgagaaattt
tgctcagtgtccctttcaaacttgaatgtctacgcatgtttagtgtgtgggaagtatttc
cagggaagagggccgaaatctcacgcatatacccatagtcttgaagctggccaccatgtc
tacattaatctctgtacagagaaagtttactgtcttcctgatggttatgaagtcattgac
ccatcattggatgacatccgccatgtactaaacccaaggttttcaagagaaaatgttatc
cagattgaccagaatcgtcagtggtccagggcgcttgatggttctgattatcttcccgga
atggtggggttgaataatatcaaagagactgattttgtcaatgttaccattcaatctttg
atgcgtgttactcccttgaggaacttctttcttatacccgataactacgcccattgcaaa
tcccaacttgttcatcgatttggagagctcactcaaaagatctggcatgcaagaaacttt
aaaggacaggtcagtccacatgaatttctccaggcagttatgaaggctagtgggaaaaca
taccgaataggtgctcaatcagatccagttagatttatttcatggcttcttcaaacattg
catagagatcttagaagatctaaaaacggcagcagcatcattcaccagtgctttcagggt
gagctggaggttgtcaaggagatccatagcaagcatataggagagaaaaaagagaatggg
gacaatggaaatgatgcaggtaatgtcatcttagagacgagcaaaatgccattcttaatg
cttggcctggacttgccaccacctccactctttaaggacattatggagaagaacattatt
ccacaggttccacttttcaacatactcaagaagtttgatggcgaaactgtgactgaggtg
gttcgccctgatacagcaagaatgagataccgcgtcacgaaattgccacagtatcttatt
ctccacatgcttcggtttacaagaaacaatttttttgtcgagaaaaatcctacactcgtt
aatttccctgtgaagaatcttgaactgaaagattacattccccttcctgtaccgaaggat
aaggagaaattgcgatcaaagtacgacttgattgctaatattgttcatgatggtaaacca
ggtggaggatcatatagagtatttgtgcagcgaaagtcagaagagctatggtatgaaatg
caggatctccatgtatcagagacgttgccacagatggtagccctttccgaagcatacatg
cagatttatgagcagcagcagtag
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