Salvia splendens (scarlet sage): 121743010
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Entry
121743010 CDS
T07627
Name
(RefSeq) protein argonaute MEL1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121743010
03036 Chromosome and associated proteins [BR:
sspl03036
]
121743010
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121743010
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121743010
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
121743010
microRNA pathway
RISC loading complex
121743010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
121743010
NCBI-ProteinID:
XP_041992116
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All DBs
Position
8:2324489..2330494
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AA seq
971 aa
AA seq
DB search
MSGRGGRSGGGGRGRGRVGGGRGPPDAGRGQQAARGGGGPGRGGAGGYNAPPQPVVAAPS
QPSRPEPAASLSHEMEQKLTLKASSSQTPQTQRPPAAAANPPPVQPELPPASSKAVRYPQ
RPGFGSFGRKVVVKANHFLTEIGNRDLRHYDVSISPEVTSKKVCREILNQLVTNYKDSHL
GKRMLAYDGSKSCYAAGELPFESKDFVVELNSGDSQSRRERKFKVSIKFAAKVDLHHLQQ
FILGRQLDLPQETLQLFDVVLRQNPSNSCAVVGRSFFSPMLGDIGELGNGLMYWKGFYQS
LRPTQMGLSLNIDMSARAFFEPIRVSQYVQKHINKDLSRGLSDQDRIKVKKALKGVRVET
QHLGQIRRHKISGITTMSTRQLMFSMDGMEAQISVAQYFSQQYSISLDYPNLPAIQAGSD
TKPIYLPMELCKIVEGQRFSRKLNERQVTALLKATCQRPKDRESSILQMVRKNDYNNDKL
VNGQFGINVRSEMVSVDARVLPPPMLKYHETGKNSLVTPSVGQWNMIDKKMVNGGKVEFW
ACINFSRMHSNHAGQFCDDLIDMCCSRGMEFNQRPLVPVRNAHGPIEKALIDLETESSKA
GKQLQLLIVILPEMTGSYGTIKRVCETELGIVSQCCLPKNVSKPGNQYKQYLENVSLKIN
AKAGGRNSVLEMAVKGKFPYLSDRPTIIFGADVTHPSPGEDLSPSIAAVVASTDWPEVTK
YRALVSTQAHREEIIQDLYHKREDPKRGVIHGGMIREHLVAFYKSTKLKPHRLIFYRDGV
SEGQFSQVLLHEMEAIRKACNSIEENYMPRVTFIVVQKRHHTRLFAANHNDRNNTDRSGN
ILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPTHYHVLYDENAFTADGLQMLTNSLCYT
YARCTRSVSLVPPAYYAHLAAFRARYYIEGTDFSDSGSASDAGRGATRERNREVGPLPKI
KDNVKDVMFYI
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaagaggaggccgatcaggagggggaggccggggacgcggtcgcgtcggaggc
ggaagaggaccaccagacgccggtcgaggccagcaggcggcgcgcggcggcgggggacca
ggtcgcggcggagccggtggctacaatgcgccaccgcaaccagtcgttgcggcgccttct
cagccgtcgcggccggagccggcggcgtcgttgtctcacgaaatggagcaaaagcttacg
ctgaaggcatcttcatcacagactcctcagacgcagagacctccggcggcggcggcgaat
cctccgccggttcagccggaattgcctccggcttcgtcgaaggcggtcaggtatccgcag
aggcctggatttggaagcttcggccggaaagtggtggtgaaggcgaatcacttcctcacg
gagatcggaaacagagatctgcgccattacgatgtttcaatatctcctgaagtgacatct
aagaaggtgtgtagagagattttgaaccagcttgttacaaactataaagactcgcatcta
ggcaagaggatgctcgcatacgatggaagtaaaagttgctacgctgctggcgagttgcct
tttgaatcaaaagattttgtggttgagctaaacagtggtgatagtcagtcgaggagagag
cgcaagttcaaagtgtcgatcaaattcgctgccaaagtagacctgcatcacctacagcaa
ttcatactgggcaggcaactggatctgccacaggaaaccctgcaattatttgatgtggtt
ttgaggcagaatccttctaacagctgcgcagtggttgggaggtcatttttctcgcctatg
ctgggtgatataggagagctaggaaatggtctaatgtattggaaaggcttctatcaaagt
cttcgccctacacagatgggcctgtctctcaacattgatatgtctgctagggcattcttt
gaacctattagggtctcgcaatatgttcaaaaacatatcaacaaagatctgtctaggggt
ttatctgaccaagatcgcataaaggtcaaaaaagctttaaagggtgtacgggtggagacc
caacatctaggtcaaatcagacgccataagatttcaggcatcacaaccatgtccacccgg
cagttgatgttttccatggatggaatggaagctcagatctcagttgcacaatacttcagt
cagcagtacagtatttctctagactatccaaatttgccagcgattcaggcaggcagtgac
actaaacccatttatcttccaatggagctttgtaagattgttgagggtcagcgattctct
agaaaattgaatgaaagacaagttactgcactattgaaggcgacatgccaacgccccaag
gatagagaaagttcaatcctccagatggttcgtaaaaatgattacaacaatgataagctt
gtgaacggacaatttggcattaatgttaggtctgagatggtatctgtagatgcacgggtg
ttgcctccgcctatgctgaaatatcacgagactggtaaaaatagtctggtaactccaagt
gtagggcagtggaacatgattgacaagaaaatggttaatggaggaaaggttgagttttgg
gcttgcatcaacttctcaaggatgcatagtaaccatgctggccaattttgtgatgatttg
attgatatgtgttgcagtagagggatggaatttaatcaaagacctctagttcctgttcgc
aatgcgcatggcccgatcgagaaggccttgattgatcttgagaccgagagttccaaggct
ggaaaacaactccagttgctcattgtcattttgcctgaaatgactggatcatatgggacg
ataaaacgagtttgtgaaacggagttaggtattgtctcacagtgctgtctaccgaagaat
gtatcgaaacccgggaatcaatataagcaatacttggagaatgtctcccttaaaataaat
gcaaaggctggaggtcgaaacagcgtgttggagatggccgtgaagggaaagtttccttat
ctcagcgatcgacccactattatattcggagcagatgttactcatccttcaccaggagag
gatttgagtccctctatagctgcggttgttgcttcaactgactggcccgaagtaacgaag
tatagagcactcgtttctacacaggctcacagggaagaaatcattcaggatctttaccac
aagcgagaggatcctaaaaggggagtaatccatggtggaatgattagagagcatttagtg
gctttctacaaatccactaagcttaaacctcacaggctcatattctacagggatggggtt
agtgaaggacaattcagtcaggtccttcttcatgaaatggaggcaataaggaaggcttgc
aactctattgaggaaaattacatgccaagggtcacttttatcgtcgtgcaaaagaggcat
catacacgtctttttgctgctaatcacaatgataggaataacaccgataggagcggcaac
attcttcctggcaccgttgtcgacacaaagatatgccacccaactgagttcgatttctac
ctctgtagccatgctggcatccagggtacaagccgccccacccactaccatgtcctctat
gatgagaacgcgttcacagccgatggtctgcaaatgctgacaaacagcttgtgctatacg
tatgccagatgtactcgctcggtgtccctagttccaccagcgtactatgcgcatctagct
gctttccgagctcgttactatattgaaggcaccgacttctctgacagtggatcggcttct
gatgctggtcggggtgctactcgggagaggaacagagaggttggacctctgccaaagatc
aaagacaatgtgaaggatgtgatgttttacatctga
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