Salvia splendens (scarlet sage): 121743125
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Entry
121743125 CDS
T07627
Name
(RefSeq) protein HIRA-like isoform X1
KO
K11293
protein HIRA/HIR1
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sspl03036
]
121743125
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
121743125
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
EIF3I
WD40_Gbeta
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR41
DSE1_N
Tricorn_2nd
ASA1
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
PAC11
Motif
Other DBs
NCBI-GeneID:
121743125
NCBI-ProteinID:
XP_041992252
LinkDB
All DBs
Position
1:complement(13278437..13284890)
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AA seq
1047 aa
AA seq
DB search
MIAEKPSWIKHGTSQIFSIDIQPGGLRFATGGGDHKVHIWNTKYVGREKQNDDSASKLLA
TLRDHFGSVNCVRWAKHGRYIASGSDDQVILVHERKPGSGTAEFGSGEPPDVENWKVTMT
LRGHTADVVDLNWSPDDSTLASGSLDNTIHVWDMSTGICTAVLRGHSSLVKGVAWDPIGS
FIASQSDDKTVIIWRTSDWSLVHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPR
HSAPVLERGEWSATFDFLGHSAPIIVAKFNHSMFRRTLSNSEDLKTSLVGWSNGSSKVEG
KELQPYNVIAIGSQDRTITLWTTVSPRPLFVAKHFFAQSVVDLTWSPDGYSIFACSLDGT
VATFHFDASEIGYKLTDAELDDFKRNRYGDARGRQGNLAETPAQLLLEAASVKQTLSKKI
RAVVPESQASLRPSVDLGVTKKINKTVVNDRKKTDDAIGDVSNKVVSARMSNPVNQKEYR
CPDGRKRIIPEAVGVTAHHERTSIGDHSEGLQLVVNSLDHNKDNNGEIHTGNGTREGSIR
KVIGGSADIRECSGLTARASISENLIIEKVPASGSKETCTNVEHVSQLPSGSILSIRVFE
KKQGEDAICLEACPREHAVNDIVGAGNTLMIRETELSCTRGSQNLWSDRISGKVTVLSGN
SNFWAVGCEDGSLQVYTRCGRRAMPTLMMGSGAVFIDCDEFWKLLVVTRKASLYVWDLFN
KTCLLQDSLASLVTTDLKSDAGTVKVISAKLSTSGSPLVVLATRHAYLFDMSLKCWLRVA
DDCFPASNFSSSWTLGSALSGELAALQVDVRKYLARKPGWSRVTDDGMQTRAHLEAQLAS
ALALNSPNEYCQCLLSYVRFLAREADESRLREVCENFLGPPLGMAESGSDAKSPVWDPSI
LGMDKHKLLREDILPAMASNRKVQRLLNEFMDLLSEYATIETNSEQKNRPQPTSPSHPTK
DAMDSNSPTIEREDCYPAATCENVLEPAATTADPTLQYTDEMDVVTMTRESQADSVKTTS
QTTDEMNIDIPVSDQVENAAPSTKQDS
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcggagaaacctagttggattaagcatggcacctctcagatattctccattgat
attcagcctggtggcctcaggtttgccactggtggtggtgatcataaggttcacatttgg
aacacaaaatatgttggcagagagaagcaaaatgatgattcagcttcaaagcttcttgca
acactgcgggatcattttgggtctgttaactgtgttagatgggctaagcacggaaggtat
attgcatctggatcagatgatcaagttattctagttcatgagcggaagcctggctcggga
accgcagagttcggcagtggagagccgcctgatgttgagaactggaaagttacgatgact
ttgagaggtcacactgctgatgtggtggatcttaattggtctcctgatgactcaacattg
gccagtgggagtctggacaataccattcatgtttgggacatgagtaccggaatctgcact
gcagttcttcgtggtcattctagtcttgtaaaaggtgtagcctgggatcctattgggtca
tttatagctagtcaatcagatgacaagactgtcataatatggcgaacaagtgattggagc
cttgttcatagaactgatggtcactgggctaaatctcttggttccaccttcttcagacgg
cttggctggtcaccgtgcggtcattttataacaacgacacatggttttcagaagcccagg
cattctgcacctgttctcgagagaggggaatggtctgccacgtttgactttttaggacat
agtgcaccaatcattgttgctaagttcaatcattcaatgtttaggaggactctgtccaat
tccgaggacttaaaaacttcattggttggttggagcaatggttcttcaaaggttgaagga
aaagaattacagccatataatgttattgcaataggaagtcaggaccgcaccataactctg
tggactacagttagccctagacctctttttgtggctaagcatttcttcgctcaaagtgtg
gtggacctcacctggagccctgacgggtactcaatatttgcttgttccttggatgggaca
gtggcgacatttcattttgatgcgagtgaaattggatataaattaactgatgctgaacta
gatgattttaagaggaatcgctatggcgatgccagaggtcgtcagggtaacttagctgag
actccagctcagttattgcttgaagcagcatctgtgaagcaaactctgagtaaaaagata
cgtgcagttgttccagagagtcaggcatctttgagaccttctgttgatttaggggttact
aaaaaaattaataagactgttgtaaatgatagaaagaaaactgatgatgctatcggtgat
gtgtcgaacaaggtggtctctgctcggatgtcaaatcctgtaaatcagaaagaatataga
tgccctgatggtcggaaaaggataataccggaagcagttggtgttactgcccatcacgag
agaacatctattggtgatcactcagaaggtcttcagttagttgtgaattctttagatcat
aacaaggataataatggagagatacatactggtaatggtactcgagaaggttcaataaga
aaggttataggtgggagtgctgatataagagagtgttctggtctcactgctagagcatct
attagtgagaacttgattattgagaaggttccagcctctggtagtaaagaaacatgcact
aatgtcgagcatgttagtcaactaccttctggtagtattctttcaatacgagtatttgaa
aagaaacaaggggaagatgcaatttgcttagaagcctgtccaagagagcatgcagttaat
gacattgtgggagcaggaaacactttaatgatcagagaaacagaactttcctgtacacga
ggctctcagaatctttggtccgataggatctctgggaaggtcactgtcttgtctggaaat
tcgaacttctgggctgttggttgtgaagatggatcactccaggtttacacaagatgtggg
aggcgagccatgccaaccctgatgatgggttctggagcagtatttattgattgcgatgaa
ttctggaagttgttagttgtcacaaggaaggcgtccttgtatgtttgggatcttttcaac
aagacatgtctacttcaggattccttagcttcactggtaacgacagacctaaaatccgat
gctggtactgtcaaagttatatctgcaaaactatccacatctggatctccccttgttgtc
ttggctacacgccatgcatatctttttgacatgagtcttaagtgttggctgagagttgca
gatgattgttttcctgcatcaaatttctctagctcatggaccctaggttcggcacttagc
ggtgagctggctgcgttacaggttgatgtccggaaatacctggcacggaaaccagggtgg
agcagagtgactgatgatggaatgcaaacgcgtgctcatttggaagctcagctggcatct
gctttggctttgaattctcccaatgaatattgccaatgtcttctgtcgtatgttcgcttt
ttagcaagagaggcagatgagtcccgcctaagagaagtttgtgagaactttcttggaccc
ccccttggaatggctgaatctggatcggatgcaaaatcaccagtgtgggacccttctatt
cttggtatggataagcacaagcttctccgcgaagacattcttccggctatggcatccaac
aggaaagtccaacggttactcaacgagttcatggatctcctttctgaatatgccaccatt
gagacaaactctgagcagaagaatcgaccacaaccgacttcaccatcccatcccacaaaa
gatgcaatggattccaactctcctacaatagagagagaagattgttatccagcagccact
tgtgagaatgttctcgagccagctgctaccacagcggatcctactctgcagtatactgat
gaaatggatgttgtgacaatgacgagagaatctcaagcagattctgttaaaactacgtca
caaacaacagatgaaatgaatatagacatccctgtctcagatcaagtggaaaatgctgcc
ccatctacaaaacaggactcttga
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