Salvia splendens (scarlet sage): 121743301
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Entry
121743301 CDS
T07627
Name
(RefSeq) mRNA-decapping enzyme-like protein isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121743301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121743301
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121743301
mRNA degradation factors
5'-3' decay
Decapping complex
121743301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
121743301
NCBI-ProteinID:
XP_041992500
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All DBs
Position
1:13563713..13567090
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AA seq
367 aa
AA seq
DB search
MSQNGKLMPNLDEKTTKVLNLTVLQRIDPFVEEILITAAHVTFYEFNIDTSQWSRKDVEG
SLFVVKRNTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNASQEVNGIWFYNA
RECEEVANLFSRILNAYSKVPTKSKVSSVKSEFEELEAVPTLAVMDGPLEPTSSIANATE
VSDDPSFMNFFSNALNIGAAPNTTMSGQPFNPSATVIPASHPQIVSLPTLTTAQPPSNLS
ASTPKMSILENTERTTAQRSADLVKPSTFFGPPPSSAGLALPPVSSAIPTAPPLNTPGNL
QRPYGAPLLQPFPPPTPPPSLTPTAPTPNYGPPISREKVRDALQLLVQDNQFIDMVYRAM
LSANQQS
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagaacgggaaattgatgcccaatctcgacgagaagaccaccaaagtcctcaat
ctcacggtgctgcagcggatcgatccattcgttgaggagattctcatcaccgctgcccac
gtcaccttctacgaattcaacatcgacactagccaatggagtcgcaaggatgtggaaggc
tcgctttttgtcgtcaaaaggaatacccagccaaggttccagtttatagtaatgaaccgc
cgaaatactgataatctggtggagaatctcttgggagattttgagtatgaagtccaggtt
ccatatctcttataccgaaatgcttcccaagaagttaatgggatatggttttacaatgcc
cgggaatgtgaagaggttgcaaatctatttagcaggatacttaatgcatattctaaggtg
cctacaaagtccaaagtatcttctgtgaaaagtgaatttgaagaactagaagcagttcca
acactggcagtaatggatgggcccctagaaccaacatcttccattgctaatgcaacagag
gtttctgatgatccttcttttatgaacttcttcagtaatgctttgaacataggagctgct
ccaaatacaacaatgtctggacagcctttcaacccctctgcaactgttattcctgcatcc
catccacagattgtttctctgccaactttgacaactgctcaaccaccatctaatttatct
gcttctacccctaaaatgtccattcttgaaaacacagaacgtaccacagcacagcgttca
gctgatcttgtgaaaccatcgactttttttgggcctcctccttcctctgctggactggct
ttaccacccgtatcatcagcaattccaacggcacctccattaaatactccaggaaatcta
cagagaccatatggtgcaccattacttcagccatttccgccaccaacacccccaccatca
ctcactccaactgctcctacgccaaattatgggccacctatcagcagagaaaaagttcgg
gatgcacttcaattgcttgttcaggacaatcaattcattgacatggtttaccgagcaatg
cttagtgcaaaccaacaatcgtga
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