Salvia splendens (scarlet sage): 121743957
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Entry
121743957 CDS
T07627
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121743957
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121743957
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-60S particles
Helicases
121743957
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
RNA_pol_Rpc4
Motif
Other DBs
NCBI-GeneID:
121743957
NCBI-ProteinID:
XP_041993300
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All DBs
Position
8:complement(14678414..14683251)
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AA seq
590 aa
AA seq
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MAAVEDNNPNKALTTTRFSELEPPLSQPVLEAISAAGFEFCTPVQAATIPLLCTYKDVTV
DAATGSGKTLAFLLPLVEILRRADPPKPHQVVGVVISPTRELALQIFKVAEPFIATLSNV
RPMLLVGGAEVKADTTKIEEEGVNLLIGTPGRLSDIMEHMDMLDFRNLEILILDEADRLL
DMGFQKQVSSIISRLPKLRRTGLFSATQTEAVEELARAGLRNPVRVEVRSEIKRPKDVTS
SQQIASSKTPSGLKMQYFQCEADQKPQQLIDLLLKNKAQKIIIYFMTCACVDYWGAVLPR
LSLLKGFSLIPLHGKMKQAAREKALASFTSLSSGILLCTDVAARGLDIPGVDCIIQYDPP
QDPNVFIHRVGRTARMGRQGTAIVFLLPKEEAYIEFLRIRRVPLEERQCSDEAPDIIAQI
RLAAKKDREIMEKGVKAFVSYVRAYKEHQCSFIFRWKDLEIGKLGMGYGLLQLPAMPEVR
HYSLSTQGFVPVEDIKLEDIKYKEKSREKQRKKNLAAKQAAKEQKMQQSKETTKASSSVA
TSKKTAKQRRAVQSTDDADELERDYRLLKKLKKGRIDENEFAKLTGTEEL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgttgaagacaataacccgaacaaagctctcaccaccaccaggttctccgaa
ctcgaaccgccactctcccaaccagtgcttgaagctatttcagctgccggtttcgagttc
tgcacaccggttcaggccgccaccatacccttgctatgcacctacaaagacgttacggtc
gatgctgccacgggctctgggaaaaccctagccttcctcctccccctagttgaaattctc
cgccgtgccgaccctcccaaaccccaccaggtggtgggagtagtaatttctccaactagg
gagttggcattgcagatatttaaagttgcagagccatttattgccacactgtcaaatgtt
agaccaatgctattagttggaggagctgaagtgaaagctgatacgactaaaattgaagag
gaaggtgttaatttgttaatcgggacgcctggaagacttagcgatataatggagcatatg
gatatgctggactttcgaaaccttgagatattgattctggatgaagctgatcggctgtta
gacatgggattccagaaacaggtaagttcaatcatatctcgcttaccaaagcttcgtagg
accggccttttttcagctactcaaactgaagcagttgaagagctagccagagcaggatta
aggaatcctgtgagggtagaagtgcgatccgaaataaaaagaccgaaggatgtaacctct
tcacagcaaattgcctcttctaaaactccttcagggctcaaaatgcagtattttcaatgt
gaagcagaccagaaacctcaacagctcattgatcttctcctaaaaaacaaagcccagaaa
ataattatctatttcatgacttgtgcctgtgttgattactggggagctgtacttccacga
ctttccttattgaaaggattctctctgatccctcttcatggaaagatgaagcaggctgca
agggagaaggcattagcatcatttacatctctttcaagcggcattcttctttgcactgat
gtagcagctcgtgggcttgacattcctggtgttgactgcattatacagtatgacccccca
caggatcctaatgtgttcatacacagagttggccgaactgcccgaatgggacgacaagga
actgctattgtgttcttgttaccaaaggaggaagcatacattgaattcctcaggataagg
agagttccactcgaagagagacaatgttcggacgaggctcccgatatcatagcccagata
cgtttagcagccaaaaaggaccgtgaaattatggagaaaggagttaaggcctttgtatct
tatgttcgtgcttataaagagcaccaatgttcttttatcttcaggtggaaagatcttgaa
attgggaagttggggatgggatatggactgttgcagcttccagcgatgcctgaagtaagg
cactactctctatccacccaaggttttgttcccgttgaagatataaaactggaggatatc
aagtacaaagaaaagtctcgggagaagcaaaggaagaaaaacctggcagcgaaacaggct
gcaaaagagcaaaaaatgcagcagtcaaaagaaacgacaaaagcttctagctctgtggcc
acaagtaagaaaacagccaaacagagacgtgcagttcaatcaacagatgatgcagatgag
ttagaacgggattatcgcctcctgaagaaattgaaaaaaggaaggatcgatgaaaatgaa
tttgcaaaattaaccggaacagaggaattatga
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