Salvia splendens (scarlet sage): 121744288
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Entry
121744288 CDS
T07627
Name
(RefSeq) BRCT domain-containing protein At4g02110-like
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121744288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspl03032
]
121744288
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121744288
DNA replication proteins [BR:
sspl03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
121744288
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
121744288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
Motif
Other DBs
NCBI-GeneID:
121744288
NCBI-ProteinID:
XP_041993703
LinkDB
All DBs
Position
8:6375332..6381564
Genome browser
AA seq
1456 aa
AA seq
DB search
MLASKQISAYNDPSKAFVGIRFVLFGFDSVREDEVRAKLLEGGAVDTVNYGPDCNHVIVD
NLLYDDPICAAARRDGKILVIGNWVDHCFYGGMLVDPTSVMYWPVRDPSGIPAAKSLVMC
LTGYLRQDRDDIMNMVSLLGATFTKPLLATKVTHLICYKFEGEKYELAKKMKTIKLVNHH
WLEDSLKAWQLLPEADYAKSGFELMMEAQAKDSEEETEDMASVDLKKKSITSPHNALVEN
RNFQLPEQQGVSRTSHYVTAFESFANVGNTSKTNSTPRKVNTGKTQSIPRKEADFGNASL
SRDTHGENISTSNTSCARSPAKMFYGVPSNVPDGTTNSENIEHVIASASGSARKSVNDGL
SRLSSKSMKVSLPLRSERIESNPGSPLSNASKTGLCGGFDISMERDPDETDSHGIRSALK
GSFLLPNEGETVGSHRTNNSTVPRGSLRSPALSHSPKTLIRSGLATKPTEMPVSRSSVDG
SCRITCDMSPFKGTSYLREEITDGFAMPSEIIQDGTGSTGLNTPLKGALSHLDEEQTDSL
PRTNKMTISRGGSKSRRLSRSPSTQPGCLREAVGGAFVLPSENIEDGTESTEIQTPLKGA
SRYHEEEQPSSLSGTKKMNVPRSGSKSKKQTRSSKILMGSGLDAKPMEMLVSGSSVHGTH
QVAANVTPTNVTSCMREEVGGFLNMPSERDGDTTESGLVKTPLDGVSLHPNKEQTSSLPG
RKKTTVSRSKSKSTKLSRSQKTLVGTVLDTKATEILVSGTPIHGSRQSAVDISPPTDITS
QLREEALLISKEALATSTLLDGKQECGDHTITYSRGRPKKRRSPDSDVKDLSASRTKSCT
GEEDIHQSDLPDVRPPFPGSSSMVEKLDDHTDLNSSKVDQTGTKSKSPKKKMLARKTLGS
KPTSCKEKTTKYKGLLSAVLQSKSAGHSNGAAAAEHTKNASHAEKFVTVSSNRNEDETVG
DETEAPECEGPNEFDMGSKNSAEVKEHHTSKQSSKRNTQKKEAKSRVKKSTETKKLTELP
ESTSRGDVAENKITEGKKRPLPKSKMNKLKGPTEEAKQNEKKTVSKKGEMAVSAGKTSKR
PSKKLKGPLDVEKENEPVMQPIVSCDKGAASDSTHKSKKPLKDGSKVDKVSTQDLTTKTE
PAWFILSGHRLQRKEFQQVIKRLKGKVCRDSHNWSYQATHFIVPDPIRRTEKFFAAAASG
SWILKTDYLTAGTEAGRFLPEEPYEWQKKCLTEDGSINLEGPRKWRLLRERTGHGAFYGM
RIVIYGECIAPPLDTLKRVVKAGDGTILATSPPYTRFLNSRVDFAIVSAGMPHVDMWVQE
FLRHEIPCILADYLVEYVCKPGYSLDKHVQYQTHAWAKRSLENLVNRMEAVEDHPKTPEE
HRVDDTVCQGCGSLDRGDEMLICGDESGTHGCGVGTHTDCLDPPLEAVPEEDWFCRDCCH
KTSSRSSKKRAKKSKK
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atgctggcaagcaagcaaatttcagcatacaatgacccctccaaagcatttgtcggaatt
cgattcgttctcttcgggttcgattcagttagagaagatgaggtgcgggcgaagctttta
gaaggaggggcagttgatactgtgaattatggtccagattgtaatcacgtgatcgtcgat
aatcttctctatgatgatcccatatgtgctgctgcgcgaagagatggcaagatattggtg
attggaaattgggtggatcactgtttttatggggggatgcttgttgatcctacttctgtc
atgtattggccagtaagagatccgagtgggattccagccgctaagtccctggttatgtgc
ctgactggatatctaagacaggatagagatgatatcatgaatatggtttccttgttgggt
gccacttttacgaagccattgctggctaccaaggttactcatctgatatgttacaagttt
gagggggagaaatatgagcttgccaagaagatgaagacgataaagctagttaaccatcat
tggctagaagatagtctgaaggcctggcagctgcttccagaagctgattatgccaaaagt
gggtttgagttgatgatggaggctcaagctaaagattccgaagaagagacagaagacatg
gcctcagttgatctgaagaagaaaagcatcaccagtcctcacaatgcactagttgagaat
agaaatttccagttacctgaacagcagggggtttcaagaaccagtcattatgtgactgca
tttgaaagttttgcaaatgttggaaataccagcaaaaccaactcaactcctagaaaagtg
aataccggcaaaacccagtcaattcccagaaaagaggccgactttggaaatgcatcatta
tctcgtgatactcatggtgagaatatcagtacttcaaacacttcttgtgccaggagtcct
gctaaaatgttctatggggtgccatcaaacgtacccgatggcacaacaaactctgaaaac
attgagcatgtgatagcttcagcatctggaagtgctaggaaatctgtgaatgatggcttg
tccagattaagtagcaagagtatgaaggtcagtctccctctgaggtctgaaagaattgaa
agtaatccaggcagccctttgtcaaatgccagtaaaactggactttgtggaggttttgac
atatcaatggagagagatccggatgagactgattctcatggtatcagatcagcattgaag
ggaagcttcttgctccctaatgagggggaaaccgttggatcacaccgtacgaacaactca
actgttccccgtggtagtctgagatcaccagccttaagccattccccaaaaacattaatc
agaagtggattggctacaaaaccgacagaaatgccggtttctagatcttcagttgatggt
tcatgcagaataacctgtgatatgtctccgtttaaaggtactagctatttgagagaagaa
attactgatggttttgccatgccatcagagataattcaagatggaactggatctactggt
ttaaacactcctttaaagggagctttgtcgcacctcgatgaggaacaaacagacagtttg
cctcgtacgaataaaatgactatttcacgtggtggttcaaaatcaagaaggctaagccgt
tctccaagcacccaacctggctgtttgagagaagcagttggtggcgcttttgtcctgcca
tcagaaaacattgaagatggaactgaatctactgaaattcagactccgttaaagggagcc
tcgcggtaccatgaagaggaacaaccaagcagtttgtctggtacgaagaagatgaacgtt
ccacgcagtggttcaaaatcaaaaaagcaaacccggtcttcaaagatattaatgggaagt
ggattggatgcaaaaccaatggaaatgctggtttctggatcttcagttcatggtacacat
caagtcgctgctaatgttacccccacaaacgttactagttgtatgcgggaagaagttggt
ggttttcttaacatgccgtctgagagggatggagatacaactgaatctggtttggtaaag
actcctttagatggagtctcattgcaccctaacaaggaacagaccagcagtttgcctggt
aggaagaaaacgactgtttcgcgtagcaagtccaaatcaacaaaactaagccgttctcag
aagacattagtggggactgtattggatacaaaagctacagaaatactggtttctggaact
ccgatccatggttcacgtcagtcagctgttgatatatctcctcccacagatatcaccagc
caattgagagaggaagctttgctgatctctaaagaagctttagccacttctactctacta
gatggaaaacaagagtgcggtgatcacacaattacatattctagaggaagacccaaaaag
cggagatcgcctgattctgatgtgaaggacctttctgcgagcaggaccaaatcttgcact
ggggaagaagatatacatcaaagtgatctaccagatgtcagacccccatttccgggttca
agctctatggtagagaaactagatgatcacacggatttgaactcatcaaaggtggatcaa
actggcaccaagtcaaaatctccaaagaaaaagatgcttgccaggaagacattgggttcc
aaaccaacttcatgtaaagagaaaactacaaaatataaagggctgctttccgccgtgttg
cagagtaagtctgcaggtcattcgaatggagcagcagcagctgagcacacaaaaaatgct
tctcatgccgagaaatttgtcacagtctcttcaaaccgcaatgaagatgaaactgtaggc
gatgaaactgaagctccagaatgcgaagggccaaatgagtttgacatggggagcaagaat
tctgcagaagtcaaagaacatcatacaagcaagcaatccagcaaaagaaacacacaaaag
aaggaagcaaaatcaagggtaaagaagagcactgaaactaaaaagttgacagagttgccg
gaatcaacatcaagaggtgatgttgcagagaataaaataacagagggcaagaaacgtcct
ttgcctaaatccaagatgaataaattgaagggtcctaccgaggaggccaaacaaaacgag
aagaagactgtctcaaagaaaggagaaatggctgtgtcagctggtaaaaccagtaaaaga
ccatctaagaaactaaaaggtccacttgatgtggagaaggaaaatgaacctgttatgcag
ccaatcgtaagctgtgataaaggagcagcttcagattctactcataaatccaaaaagcct
ctaaaagatggcagtaaagtcgacaaggtcagtacacaggacctaaccaccaagaccgaa
cctgcatggtttatattgagcggccataggcttcaaagaaaggagtttcagcaggttata
aagcgattgaaaggaaaagtgtgcagggattctcataattggtcatatcaagcaacacat
ttcattgttccagatccaattcgaagaactgagaagttctttgcagctgctgcatctgga
agttggattcttaaaactgattatctaactgctggcaccgaggctggaaggtttttgcct
gaagagccatatgaatggcaaaagaaatgcttgacggaagatggatcaatcaacttagaa
ggtccacggaaatggcgtcttctgagggagagaaccggtcatggagcgttttatggaatg
cgtatagtcatatatggcgagtgcattgctcctccactggatactttgaagcgtgttgta
aaggctggagatgggaccatactagcaacctcccctccatacacgcggtttctaaattca
agggttgatttcgccattgttagcgcaggcatgccccatgttgacatgtgggtgcaagag
tttctcaggcatgagataccttgcattctagccgactatctggtagagtatgtgtgcaag
ccaggctattcccttgataagcatgtgcaataccaaactcatgcttgggctaagagatca
cttgagaatctagttaaccgcatggaggctgttgaggaccaccctaaaacaccggaagag
caccgggtcgatgatacagtgtgtcaagggtgtggatcgcttgacagaggagacgagatg
ctcatatgtggtgatgaaagtggtacccatggatgcggtgtaggtacccacacggactgc
cttgatcctccgcttgaggctgtgccagaggaagactggttctgccgtgactgctgccat
aaaactagcagccggagttccaagaaacgagccaagaaatcgaagaagtga
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