Salvia splendens (scarlet sage): 121744415
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Entry
121744415 CDS
T07627
Name
(RefSeq) ATP-dependent RNA helicase DEAH13
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121744415
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
121744415
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
90S particles
Helicases
121744415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
DUF7803
ATPase
nSTAND3
Motif
Other DBs
NCBI-GeneID:
121744415
NCBI-ProteinID:
XP_041993870
LinkDB
All DBs
Position
8:complement(2021073..2027498)
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AA seq
1310 aa
AA seq
DB search
MKPSRNSNAAGPNSSSEIGGGDLIILPPKKKKEKGKNQLNVRQQPKLSKSQKRKLKKLEE
EKEKELLMSKSIETLEKYKIKDDVFSLMWSSRNLGQVETVREKRRREVEFSKAGLELPHA
EKAQTKRKRDKASQNNDDVEVSEEEICLPDTNVHSDASMQPLRDEPNDRRAGDSFEDVAN
DNTQPSLPRSEEKSTESCQIEEITKPKDVMDEDPIYNPEGENNHNNCISLRNHVAPTVVH
VSRPKDVEKQRMGLPIVMMEQEIMEAINENISLIICGETGCGKTTQVPQFLYEAGFGSRG
SNNGGGIIGVTQPRRVAVLATAKRVAYELGLRFGKEVGFQVRHDRKVGENCSIKFMTDGI
LLREVQNDFLLKRYSVLILDEAHERSLNTDILIGMLSRVIQERQREYEMQEKKILAGETI
ESGNRIYPLKLVLMSATLRVEDFVSNTKIFRNPPPVIEVPTRQFPVTTHFSKKTEIVDYI
GQAYKKVLSIHKRLPPGGILVFVTGQREVELLCQRLRRASRKLVEDKASSVSVEKPPEEN
DMKEIGEAFEFQGSSGHEITERFNSHMEEDNEDFPEDTSDASYDSEEESDLEFFSDGENQ
TKPESVGDILEEEGTLTSLKAAFEALSGKRVSDSNTKAKDVPETPEGGSDPSRSLSERDD
KDNGYSPGKLNVLPLYAMLPASSQLRVFEDARDGERLVVVATNVAETSLTIPGISYVVDT
GREKVKNYNSSSGMETYEIQWISKASAAQRAGRAGRTGPGHCYRLYSSAAFNNLFSDFSI
AEISKVPVDSVVLLLKSMHIGKVANFPFPTPPETNALIEAERCLKILEALDENGRLTALG
KAMARYPMGPRHSRMLLTVIQIMQKAKKCARANLVLAYAVAAVAALSLTNPFLRHFEDNG
NNADGKSHAEEGDPKESKKASDKEEKLRKKQQKQIARASCEKFANPTSDALTVAFALQSF
DLSENQSQFCDENALHYKTMEEISKLRKQLVKLVFASHDSQQDFSWAHGTIEDVESAWMV
SSDKHPLQLNEEEILGQAICSGWADRVAKRIKGASLLAEGDRNTNAVRYQACMLKETVFL
HRWSSISRSAPEFLVYSELLHSKRPYIHGATVVKPNWLPEYARVSCSFSAPLSEPKPYYD
ATADQVMSWVAPTFGPHLWPLPLYGLPIKDDSTRVAVFAYSLLEGQILPCLKDVRKFMAA
SPATVLKPEARGLKRIGNLSSKLNKKGRVIDTRAKLGNMWKENPRFLFPEILDWFQEGFF
NRFEELWEEMHRQALGDPKQRLKKRTKKLKREGRLILASGVEGMEEFRQR
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgtcacgaaattccaacgccgccggacccaattcaagctcggagattggtggc
ggagacttaatcatattgccgccgaagaaaaagaaagagaaaggaaaaaatcagctcaat
gtgaggcagcaaccgaagctcagtaaatctcagaaaagaaagctaaagaagcttgaggag
gagaaagaaaaggaactccttatgtcaaaaagcattgagacattggaaaaatacaagatc
aaagatgatgttttttcactcatgtggtcttcaaggaacttggggcaggttgagactgtt
cgtgagaaacggagaagagaagttgagttttctaaagccggtttggaactcccacatgct
gaaaaggctcaaactaagaggaaaagagataaggcatctcaaaacaatgatgatgttgaa
gtgtctgaggaagaaatctgtttgccggatacaaatgtgcattcagatgccagtatgcaa
ccattgcgtgatgaacctaatgatagacgagctggtgattcattcgaagatgtggctaac
gacaatactcaaccatcattgccaagatccgaggaaaaatctaccgagtcatgccaaatt
gaagaaatcacgaagcctaaggatgtgatggatgaagatccaatttacaatcctgaaggt
gaaaataaccataacaactgtatttcattgagaaatcatgttgctccaactgtggttcat
gtctcaagacctaaggatgttgaaaagcaaaggatgggtctgccaatagtcatgatggaa
caagaaataatggaagctataaatgagaatatcagtctcattatatgtggtgaaactggt
tgcggaaaaacaacccaagttcctcagtttctttatgaggctggttttggttcacgtggt
tcaaacaatggaggtggcattattggcgtcacccaaccgcgccgagttgcagtacttgca
actgccaagcgggtggcttatgagcttgggctacgattcgggaaggaggtggggtttcaa
gtaaggcatgacagaaaggttggagagaactgctcaatcaagtttatgactgatggaatt
ttgcttcgggaagtgcagaatgattttctgctgaagcgatactcagttttaatattggat
gaggctcatgagaggagtctgaatacagatatactcatcgggatgctttctcgggttatc
caagagcgtcagagggaatacgagatgcaggagaagaaaattctggccggggaaactatt
gaatctggaaataggatataccctttgaagcttgttctcatgagtgctactctacgcgtg
gaagattttgtgtcaaatacaaaaatatttcgcaatcctccaccagtgattgaagttcca
actcgacagttcccagtgaccacacacttctcaaagaagactgaaattgttgattatatt
ggccaagcttataagaaggttctatcaattcacaagagattgccacctgggggtattctt
gtttttgtaactggacagagagaggtcgaacttctttgtcaaaggttacgtagagcttct
agaaagctagttgaagacaaggcttcatccgtatccgtggagaaaccacccgaagaaaat
gatatgaaagagataggtgaggcatttgagttccaagggagttcgggtcatgagataact
gagcgctttaattctcacatggaggaagataatgaagattttccagaagacacatctgat
gcatcttatgactcggaagaagaaagtgatctggagttctttagtgatggtgagaatcag
acgaaacccgagtctgttggcgatattttggaagaagagggaactcttacatcactgaag
gctgcttttgaagcattatcagggaaaagagtttctgattccaacaccaaagccaaagat
gttcccgagacccctgaaggtgggtcagatccgtcccgttccctttccgaacgagatgac
aaagataatggatattcccctggtaaactgaatgtgctaccactttatgcgatgcttcct
gcatcatcccagcttcgtgtttttgaagatgctagggatggagagcggcttgttgtagtt
gccactaatgtggctgaaacctctttgacaattcccggaataagctatgttgtcgacact
ggaagagaaaaggtgaagaactacaactcttcgagcggcatggagacatatgagatacag
tggataagcaaagcctctgcagctcagcgtgctggaagagccggaagaaccgggccggga
cattgttatcgcctctattcctcagcagccttcaataacttattttctgatttttcaatt
gctgaaatatcaaaggtgccggttgatagtgttgtcctccttttgaaatccatgcatatt
ggcaaggttgcaaatttccctttcccgacacctccagagaccaatgctttgattgaagca
gagcgttgtctgaagattcttgaagcgttagatgaaaatggcagattgacagctctgggg
aaggccatggctcggtatccaatgggtcctcgtcattccagaatgcttctcacggttatt
cagattatgcagaaggcaaaaaagtgtgcccgagcaaatctcgttttggcctatgcagtt
gcagcagtggcggctttaagcttgacaaatcctttccttcggcattttgaagacaacgga
aacaatgcagatggtaaaagccatgctgaggaaggtgatcctaaagaaagcaagaaagct
tctgacaaagaagaaaaattgaggaaaaagcaacagaaacagatcgccagagcttcttgt
gaaaaattcgccaaccctactagcgatgctctaactgttgcgtttgcgcttcaaagcttt
gatctttccgaaaaccagtcacagttttgtgatgagaatgctctacactacaagactatg
gaagaaatttccaagctgagaaagcagcttgtgaaactagtcttcgcctcgcatgattca
cagcaggacttctcctgggctcacggaactatcgaggatgtagagtctgcttggatggtt
tcctcggataagcatcctcttcagctgaacgaggaggagatattggggcaggctatctgt
tctggctgggctgatagggttgcgaagcgcatcaaaggagcttcacttttggcggaggga
gatcgaaacacgaatgcagtcagataccaagcttgtatgctgaaagaaaccgtctttctt
caccggtggtcgtccatctctaggtctgcacctgaatttctcgtatacagcgagttattg
catagtaaaaggccatacattcatggagccactgttgtgaaaccgaattggcttcctgaa
tacgctcgggtctcatgtagtttctctgcaccgctctcagagccaaagccttattacgat
gctacagctgatcaagtcatgtcatgggtggctccgactttcggcccacatctctggccg
cttcctctgtacggcctgcctatcaaagatgattccacaagagtcgctgtgttcgcctat
tcactgctagaaggccaaatcctgccgtgcctgaaagatgtccggaaattcatggcagcc
tcccctgcaaccgtgctgaagccagaggcacgtgggctgaaacgcattggcaatctatcg
agtaagttaaacaagaaaggaagagtaatcgacactcgtgctaaactgggaaatatgtgg
aaggaaaatcctagatttctcttcccagaaatcctagattggtttcaagaaggatttttc
aacaggttcgaggaactctgggaggagatgcacaggcaagctttgggagatcccaagcaa
aggttgaagaaaaggaccaagaaattgaaaagagaggggcgcttgattctggcaagtgga
gtcgaaggcatggaagagtttagacaaagatga
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