Salvia splendens (scarlet sage): 121744455
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Entry
121744455 CDS
T07627
Name
(RefSeq) crossover junction endonuclease MUS81 isoform X1
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03440
Homologous recombination
sspl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121744455
03460 Fanconi anemia pathway
121744455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121744455
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121744455
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Paralog
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
EME1-MUS81_C
HHH_8
EarA
HHH_3
Motif
Other DBs
NCBI-GeneID:
121744455
NCBI-ProteinID:
XP_041993930
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Position
8:23570830..23578707
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AA seq
639 aa
AA seq
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MDSARKTACPENEDVAAYLVNKRHELAQSSKGISDNMDMTLSKAHSNICNHQNPIRNLKD
LAQIKGVGKWILKQMQGFFQTDAGPSEIEDLTKKGNKNKGPKRYVPQKNSVAYALLISLF
RGTENGNEYMHKKELIDAAETSGLSRVPIAPEKAKGKAGHFGSSPRDWYTGWNCMKTLIS
RGLVVKSSCPAKYMLTEEGKEVARECLLRSGVVGPNKKFDGLERCPDLVQRDKVSVVDLH
EDLPDVECVKKKAKISVDIPPDYLEKGTDISSLDCLREDDTGSISFISKSRTDGHYASSS
LFQLRDGRAGTNSGDMERHANDAPRNKSSLLHTFGQSSCTLKPCSSNNVQENVTSQPAFQ
GSEAKPIALATPPLAFGEKFGDVYEVVLILDNREQFAMQGSRSRKIIENICSLFQIQIEV
RRLPVGDGIWIARHKYLGSEFVLDFIVERKKVDDLRQSIRDNRYRDQKMRLVRCGLKKMI
YLVEGDPNSSEAAESIKTACFTTEILEGFDVQRTNGLADTLKKYGNLTQSINQYYRSLDT
VQQCVGGCPPFDEFIKRCEDLDKMTVSDVFGIQLMQVSQVTEEIALAVLDMYPTLLSLAC
AYSLLEGDAIAQEEMLKRQSNNLISGTASKNIFQLIWGG
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggatagtgcaagaaagactgcgtgcccggaaaatgaagatgtggcggcgtatttggtg
aacaagcggcacgaattggcgcagagttccaagggaatttccgacaatatggacatgacg
ctttcaaaggcccattcaaacatctgtaaccaccaaaacccaattagaaacctcaaagac
ttggctcagattaagggcgtgggtaagtggattttgaagcagatgcaagggttttttcag
actgatgctggtccttctgagattgaagacttgaccaaaaagggaaataaaaataaggga
ccaaagcgatatgtgccacaaaagaattctgttgcttatgctctactaatttcacttttc
aggggaacagaaaatggaaatgaatatatgcacaaaaaggaactcattgatgctgctgaa
acaagtggattatctcgtgtaccaattgcgcctgaaaaggcaaagggaaaagctggacat
tttgggagctcgccgagggactggtacactggatggaactgtatgaaaacactgataagt
agaggccttgttgtgaagtccagttgcccagctaagtatatgttgacagaagaaggaaaa
gaagtagcacgtgaatgcctattgagatctggtgtggttggtcctaataagaagtttgat
ggtctggaaagatgtccagatttggtccaaagagacaaagtgtctgttgttgatttgcat
gaagacttgccagatgtagagtgtgtgaaaaagaaggcaaagatatctgtagatattcca
cctgattatcttgagaagggaacagacatatcatcacttgattgccttcgagaagatgat
actggtagtataagtttcatctcaaaatcaagaacggacgggcattatgcatcatcatct
ttgttccaacttagagatggtagagcagggacaaattcaggtgatatggaaagacatgca
aatgatgctcctagaaataaaagttcgttgcttcatacttttggacagagttcttgtact
ttgaaaccgtgctcatccaataatgttcaggaaaatgttacgagccagcctgccttccaa
ggatcagaagctaaacccatcgctttggcaacaccgcctttggcatttggagagaagttt
ggggatgtttatgaagtagttctgatattagacaaccgggagcaatttgctatgcaagga
tcacgttcaagaaaaattattgagaacatatgctctctgtttcaaattcagatagaggtt
agaaggttgcctgtgggtgatggaatttggatagctcgtcataagtatcttggaagtgaa
ttcgtacttgattttattgttgagaggaagaaggttgatgatttgcgtcagtcaataagg
gacaatcgatatcgagatcagaaaatgcggcttgtgcgatgtgggcttaagaagatgata
tatctggtggaaggtgatccaaattcctcagaggcagctgaaagcatcaaaacggcttgc
ttcacgactgagatcttggagggttttgacgtgcaacgaactaatggactagctgataca
ttgaaaaagtatggtaatcttactcaatcaatcaaccaatactacagatctctagatacc
gtgcaacagtgcgttggtggatgccctccttttgatgaatttatcaaaaggtgtgaagac
ttggataaaatgacagttagtgatgtatttggtatccagctcatgcaggtttcacaggta
acagaggaaattgctcttgctgttttagatatgtacccaacattgttgtctcttgcttgt
gcctattctcttctggagggtgatgctattgcacaagaggaaatgctgaaaaggcagagc
aacaacttgatcagtgggaccgccagcaaaaatatattccaattaatctggggtggttaa
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