Salvia splendens (scarlet sage): 121744516
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Entry
121744516 CDS
T07627
Name
(RefSeq) protein transport protein SEC16B homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121744516
Membrane trafficking [BR:
sspl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
121744516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
121744516
NCBI-ProteinID:
XP_041994014
LinkDB
All DBs
Position
8:25465260..25472639
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AA seq
1448 aa
AA seq
DB search
MASNPPFSVEDITDEDFFDKLVDDDDDVDFKVSPSAESGGHHVVTDGNESDEAKAFANLS
INELDDHGEVNVEQVSSSDRSVVDDLSAKVETAEQISKVETGGEHGIPLVSADSFEFGTV
LQKLENENGGANVSVNADSGKAENVGVSDVPMLSKTTSGSEIGAPGIKEVAWSAFNEESV
QNDSNGFGSYSDFFTEFGGENPSEAFSNTVGLISNNGSQDAVGNDVHGSTYMDTADNYGQ
YNHTQNDSIAADQSSSVQDMSSTQYWENQYPGWKYDYGTGKWYQVDGYDGGSSVEGNADS
NVTSTWGGAGGQVDLSYMQQTGHSVSGAVAEAGKTETVSNWNQTSLASDATKKTNWNQVS
EASGNSSVVSSDWNQASNDNNGYPAHMVFDPQYPGWYYDTIAQEWRALESYAQSEQSTAQ
VYDQTSKGDYSFTDTFSQNNTLTASSFHDQGNNYNPQIFGSQSPDQNWLGSVNNYNQQNQ
VTENNYAQNVSASLHGSQQSNIHYAVKDPYYENLSQHQNNNYSMPSQFVGGNFSQHFNDS
KVNQNDQKYFSNDFYGNQNAVNFSQQQIQNTQMTYNPASGRSSAGRPAHALVVFGFGGKL
VVMNHNNSNENLNFGSQNPVGGSITVLNLSEVVTGNIDAVNHGRGVSTYFQALCQHSLPG
PLTGGSVATKELNKWIEERLNSEPAHMDYRKAEVLKLLLSLLKIACQYYGKLRSPYGTDA
AMKESDAPESAVAKLFAFAKRNGSQFNQYGDVTRCLQQLPSEGQLQATAAEVQNLLVSGR
KKEALECAQEGQLWGPALVLAAQLGDQFYVDTVKQMALRQLVAGSPLRTLCLLIAGQPAD
VFSADTTAVNNMAGSINVPQQPAQFGANYMLDDWEENLAVITANRTKDDELVLIHLGDCL
WKERSDIIAAHICYLVAEASFEPYSDSARLCLIGANHLKMPRTYASPEAIQRTEIYEYSK
TLGNSQFVLLSFQPYKYVYALMLAEVGRTSEALKYCQAVLKSLKTGRTLELENLRNLVSS
LEDRIKAHQQGGFSVNLAPKEFIGKLLNLFDSTAHRVVGGGLPPPAPTTGGAVYGNENHY
QSGGPRVSSSQSTMAMSSLVPQSMEPINEWAADNKKIMHTRSVSEPDFGRSPMQSQADPS
KEATSASTQDKASAGGGASRLGRFSFGSQLFQKTVGLVLNRQGGRQAKLGETNKFYYDEK
LKRWVEEGVDPPAPEAALPPPPKASVFQNGASEMNSLKSEPSHNNGNLEFKSPSTMDNSP
GMPPLPPTANQYSARGRMGVRSRYVDTFNRGGGNAVSGFQSPSVPSAKPAGGINPKFFVP
APASHAEQLVVEEKQNASTTYENASSSPPNDSFHSPTPSSSMAAMQRFGSMSNIYNKEAN
DSSFALNSRRTASWGGSLNDSMSPPNRTQPPGEPLGMRPPSFRQSDTSLADSSVSGGSYG
EELQEVEL
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaatcctccattctcggtggaggatattacagacgaggatttttttgataaa
ttagtggatgatgacgacgatgtggactttaaagtctccccatcggcggaatctggaggc
catcatgtcgtgacggacgggaatgaatctgacgaggctaaggcttttgccaatttgagt
atcaatgagcttgatgatcacggtgaggttaatgttgaacaagtctccagcagtgatcgt
agcgtagttgatgatttaagtgcaaaagtggagacagctgaacagattagcaaagtggaa
acagggggtgagcatgggattccattggtgtcagctgattcatttgaatttggtaccgtg
ttacaaaaactggaaaatgaaaatggcggtgctaatgtttcggtcaatgctgacagtggc
aaggctgaaaatgtgggtgtctctgacgtgccaatgctgagcaagactactagtggtagc
gaaataggggctcctggaattaaagaagttgcctggagtgcctttaatgaggagtcggtt
cagaatgatagcaatggctttggatcgtactcagactttttcaccgaatttggtggggaa
aatccatctgaagcatttagcaacacagtggggcttatttcaaataatgggtcgcaagat
gctgttggaaatgatgtacatggatccacttatatggatactgcagacaattacgggcag
tacaatcatacacagaatgatagtattgcagcagatcagagttcatctgttcaggatatg
agtagcacccagtactgggaaaatcaatacccaggttggaagtatgactacggtactgga
aaatggtatcaggttgatggctatgatgggggttctagtgtggaaggaaatgctgactct
aatgtaacttctacttggggaggggctggtggtcaggttgatctctcttacatgcagcaa
actggtcattctgtatctggagctgtagctgaggcaggtaaaacagagaccgtttctaac
tggaaccagacctctctggccagtgatgctacgaaaaaaacaaactggaatcaggtgtca
gaagcgagtggtaatagcagtgtggtttcatcagactggaatcaggcatctaatgataat
aatggttacccagctcatatggtatttgatcctcagtaccctgggtggtactacgatact
attgcccaagaatggcgtgctttagagtcatacgcccaatctgagcagtctactgctcaa
gtctacgatcagacgagtaagggtgattattcatttactgatacattttctcagaacaac
acactgacggcaagcagttttcatgatcaaggtaataattacaatcctcaaatctttggc
agccaaagcccagatcagaattggttgggatcagtcaacaactacaaccaacaaaaccaa
gtaacagaaaataattatgcacagaatgtttctgcaagtctgcatggaagtcaacaaagt
aacattcattatgcagtaaaggatccatattatgagaatctaagccagcatcagaacaac
aactattctatgccttcccagtttgttggcggaaacttcagtcaacatttcaatgactcc
aaagtcaatcaaaatgaccagaaatacttttcaaatgacttttatggcaatcaaaacgct
gtaaacttctcccagcaacagattcaaaatactcaaatgacatacaatcctgcgtcgggg
aggtcatctgctggtcgtcctgctcatgctttagttgtctttggttttggtggcaagctc
gttgtgatgaaccataacaactctaatgaaaatttgaactttggaagccagaatcctgtg
ggtggctcaataactgttctcaacttatcagaagttgtgactggcaacattgatgctgta
aatcatggaaggggcgtaagcacttatttccaggctctctgccagcattctcttccaggt
cctcttacaggtggaagtgtggccactaaggagttgaataaatggattgaggaaaggtta
aattctgagcctgcacatatggattacagaaaggctgaagtgttgaagctgctcctgtca
ctgttaaaaatagcctgtcagtattatggaaaacttcgatctccttatggcacagatgct
gcgatgaaggaaagtgatgctccagaatcggcggttgccaaactgtttgcttttgctaaa
agaaatgggtcacagtttaatcagtatggtgatgttacccgatgcttgcagcaacttcca
tctgaaggacaattgcaggccactgctgctgaggttcaaaatcttctggtttccggaaga
aagaaggaagctttagaatgtgcacaggagggacaattatggggtcctgcccttgttctt
gctgctcaacttggtgatcaattctatgttgacactgtcaagcaaatggcacttcgccag
ttagtggctgggtcacccttgcgaacactatgcctgctcattgctggccaaccagctgac
gtcttctctgcagatactacagctgttaacaacatggctggttctataaatgtgcctcaa
caacctgcacagtttggagccaattacatgctggacgactgggaagaaaatttggctgtg
ataactgcaaatagaacaaaggatgatgagcttgtgcttatccatctcggtgattgtttg
tggaaggaaagaagtgatataattgctgctcatatatgctatttggttgcggaagctagc
tttgagccgtattcagacagtgcaagattgtgtctcattggtgcgaatcatttgaagatg
ccgcggacgtatgcaagtccagaagcaattcagaggacagagatatatgagtattcaaag
acacttgggaactctcagttcgtcctactttcatttcaaccttataagtatgtatatgca
ctcatgttggctgaagttgggaggacgtcggaggcattaaagtactgtcaagcggtacta
aaatcgcttaaaactggacgaactctggagctggagaatctgaggaatttagtttcatcc
cttgaggataggattaaagctcatcaacagggaggattctctgtaaacttagctcccaag
gaatttatcggtaaattgctaaacctttttgacagtactgcccatcgtgttgttggtggg
ggcctgccacctcctgcaccgacaacaggcggtgctgtttatggtaatgagaatcattac
cagtcgggtggacccagagtgtccagtagtcaatcaacaatggctatgtcttcattagtt
cctcaatccatggaacctataaatgaatgggcagctgataacaaaaagattatgcacaca
agaagtgtttcagaacctgactttggaaggagtccgatgcagagtcaggctgatccatcg
aaagaagcaacttctgctagcacacaggacaaagcatcagcaggaggtggtgcatctcgc
ttaggtcgttttagttttggatctcagctctttcagaagactgttggtttagtactcaat
cgtcaaggtggtcgccaggcaaaattgggtgagacaaataagttttattatgatgaaaaa
ctaaagagatgggtggaggaaggtgtcgatcctccagcaccagaagcagctcttccgccg
ccacccaaggcttcagtttttcagaatggagcatcagaaatgaattcattgaaaagtgaa
ccttctcataacaatgggaacctagaatttaaaagcccaagcactatggataacagtcca
ggaatgccaccacttcctccgacagccaatcagtactcggcacgtggaaggatgggtgtt
cgctctaggtatgttgacactttcaaccgaggtggtgggaatgcagtaagtgggttccag
tcgccttctgtaccttctgcgaaaccagcaggtggcatcaacccaaaatttttcgttccc
gcaccagcatcccatgctgagcagcttgtcgtcgaagaaaagcagaatgcttccaccact
tatgaaaatgcttcttcctctcctcctaatgactcgttccattcaccaactccctcatct
tccatggcagctatgcaaagatttggaagcatgagtaacatatacaacaaggaggcaaat
gatagctcgtttgcgttaaattcacggcgaactgcttcatggggtgggagcttaaatgac
tcaatgagccctccaaataggacacaacctccgggagagccactgggcatgcgtcctcca
tctttcaggcaaagtgacacttcgctagcagattcctcagtgagtggtggcagttacgga
gaagaactacaagaagtcgaactctga
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