KEGG   Salvia splendens (scarlet sage): 121744540
Entry
121744540         CDS       T07627                                 
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1-like isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    121744540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sspl03400]
    121744540
DNA repair and recombination proteins [BR:sspl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     121744540
SSDB
Motif
Pfam: Tyr-DNA_phospho Smr
Other DBs
NCBI-GeneID: 121744540
NCBI-ProteinID: XP_041994050
LinkDB
Position
8:complement(29374191..29380429)
AA seq 469 aa
MQVQQLPEWANTNAVSINDVIQGNVLMAVLSNYMVDIDWLLSECPMLKSVHHVLVIHGEG
DGTLAHMKRKKLPNWILHKPPLPISYGTHHSKAMLLVYPRGVRVIVHTANLIYVDWNNKT
QGLWMQDFPWKDQNTTSKGCGFENDLVEYLSTLKWPEFNANLPTAGSFSINPSFFRKFDY
SSAAVRLIASVPGYHSGPHLSKWGHMKLRTVLQECIFENQFEKSNLIYQFSSLGSLDEKW
MTELAFSMSAGMKEDKKALGLGKPLIVWPSVEDVRCSLEGYAAGNAIPSPLKNVEKQFLQ
KYWARWKSSHAGRCRAMPHIKTFMRYNGQNIAWLLLTSSNLSKAAWGALQKNNSQLMIRS
YELGVLFLPFARKHEYSFSCTDDGRLPKGELASSLSSEMKLTKLVSLVWKGEENEECGEV
IRLPVPYELPPRPYSSGDTPWSWDRRYTEKDVYGQVWPRQVELYTSQAL
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgcaagtgcaacaattgccagaatgggcaaacactaatgctgtttccatcaatgatgtg
attcaggggaacgttcttatggctgtcttgtcaaattatatggttgacattgattggcta
ctctctgaatgtccgatgcttaaaagtgtccaccatgtactcgtcatccatggggaaggt
gatggtacgcttgcacatatgaagagaaagaagcttcctaactggattctccacaagcct
cctttgcccatttcatatggaacacaccattcaaaagcaatgcttcttgtctatcctcga
ggagtacgcgttattgtgcatactgcaaacttgatatatgttgattggaacaacaaaact
cagggattgtggatgcaagattttccatggaaagatcaaaacactactagtaagggatgt
ggatttgaaaatgacctggttgaatatctgagtacattaaagtggcctgaattcaatgct
aatttaccgactgccggcagcttcagtataaacccctctttcttcagaaaatttgattat
agctccgctgcggttaggctcattgcatctgtccctgggtatcactctggcccccattta
agtaaatggggacatatgaaactaagaactgttctccaggagtgtatatttgagaatcag
tttgagaaatctaatcttatctaccagttttcttcactaggttcattggatgagaaatgg
atgacagagctagcattttcaatgtcggcaggaatgaaagaagacaaaaaagcattgggt
ctcgggaaacccttaatagtatggccatccgttgaagatgtcagatgttcgttggagggt
tatgcagctggaaatgccattccaagccctttaaagaacgtagaaaaacagttcctgcag
aagtattgggcaaggtggaagtcaagccacgcaggtcgctgtcgggcaatgcctcatata
aagacgttcatgcgttataatgggcaaaacattgcatggctactgcttacttcatcaaac
ctcagcaaagcggcttggggagctcttcaaaaaaacaattctcaactgatgatccgttca
tatgagctaggggtgctgtttttacctttcgccaggaaacatgaatacagcttttcttgt
acagatgatggacgtcttccaaagggtgaattggcatcttcactaagttcggaaatgaag
ctaacaaaactagtctccctagtttggaaaggagaggagaatgaagaatgtggtgaagtc
attcgattgcctgttccttacgaacttccaccaaggccatactcatctggagatacacca
tggtcctgggaccgtcggtatactgagaaggatgtgtatggtcaagtttggccaagacag
gtagagctgtatacctctcaagctctctga

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