Salvia splendens (scarlet sage): 121744759
Help
Entry
121744759 CDS
T07627
Name
(RefSeq) WD-40 repeat-containing protein MSI1-like
KO
K10752
histone-binding protein RBBP4
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03082
ATP-dependent chromatin remodeling
sspl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121744759
03083 Polycomb repressive complex
121744759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sspl03036
]
121744759
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
121744759
Histone modification proteins
HAT complexes
HATB complex
121744759
HDAC complexes
Sin3A-HDAC complex
121744759
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
121744759
PRC2.2
121744759
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
121744759
Heterochromatin formation proteins
Other heterochromatin formation proteins
121744759
Chromatin remodeling factors
NuRD complex
121744759
NuRF complex
121744759
NuRF complex (fruit fly)
121744759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_EML
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
eIF2A
WD_LRWD1
Beta-prop_RIG_1st
NBCH_WD40
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
121744759
NCBI-ProteinID:
XP_041994322
LinkDB
All DBs
Position
8:complement(2968110..2970717)
Genome browser
AA seq
424 aa
AA seq
DB search
MEKDDDEMRGEIEERLVNEEYKIWKKNTPFLYDLVVTHALEWPSLTVEWLPDLEEPPGKD
YSAQKMILGTHTSEDEPNYLMLARIQLPLEDSENDARHYEDERSEFGGFGCASGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTVGAEVYVFDYSKHPSKPPLDGACNPDLRLRGHNSE
GYGLSWSQFKDGHLLSGSDDAQICLWDINATPKNNALDAMQIFKIHEGVVEDVAWHLRHE
YLFGSVGDDQHLHIWDLRSPSVNKPIQSVLAHQGEVNCLAFNPFNEWVLATGSTDKTVKL
FDMRRISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRINEEQSSEDAE
DGPPELVFIHGGHTSKVSDFSWNPCEDWVVASVAEDNILQIWQMSENIYHDEDDLPGNDA
MKGS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagacgacgatgagatgaggggggagatagaggagcggctggtgaacgaggag
tacaagatttggaagaagaacacgccgttcctctacgatttggtcgtcactcacgcgctc
gagtggccgtcgctgaccgtggaatggctgcccgacctggaggagccgccgggcaaggac
tactccgcccagaagatgattctcggtacccacacctccgaagatgagcccaattacctc
atgctcgccaggattcagctgcctctcgaggactccgagaacgatgcccgccattatgag
gatgaacggtctgaattcggtggatttggttgcgccagtggcaaggttcaaattatccag
caaataaatcacgatggggaggtcaatcgggcccgatacatgcctcagaatccgtttatt
attgccaccaagactgttggtgcggaagtttatgttttcgactatagcaaacatccatcc
aagcctcccctagacggtgcgtgtaaccctgatttgaggctaaggggccacaactcggaa
ggatatggtttatcttggagtcagttcaaggatggtcatcttttgagtggttcggatgat
gcccaaatatgtttgtgggatataaatgcaactcctaagaataatgctcttgatgcgatg
caaatatttaagattcacgaaggtgttgttgaagatgtggcatggcacctcaggcatgaa
tatctgtttggttcggttggagatgaccagcatctgcatatatgggatctccgttctccc
tcagtcaacaagccaatacaatctgtacttgcccatcaaggcgaggtaaactgtttggct
ttcaatccctttaacgagtgggttctggcgaccggttctactgataagaccgttaagtta
tttgacatgcgaaggatttctactgcactacatacatttgattctcacaaggaggaggtt
tttcaggtcggatggaacccaaagaacgaaaccatcttagcttcgtgttgccttggtagg
agactgatggtctgggatctcagcaggattaatgaagagcagtcatcggaggacgctgag
gacggaccaccagagctcgtattcattcatggcgggcacacgagtaaagtatccgatttc
tcatggaacccttgtgaagactgggttgttgctagtgtggcggaggataacatacttcag
atatggcagatgtctgagaacatctaccatgatgaagatgatctgccaggcaacgatgcc
atgaaaggctcctag
DBGET
integrated database retrieval system
