Salvia splendens (scarlet sage): 121744764
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Entry
121744764 CDS
T07627
Name
(RefSeq) replication factor C subunit 1-like isoform X1
KO
K10754
replication factor C subunit 1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03030
DNA replication
sspl03410
Base excision repair
sspl03420
Nucleotide excision repair
sspl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121744764
03410 Base excision repair
121744764
03420 Nucleotide excision repair
121744764
03430 Mismatch repair
121744764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspl03032
]
121744764
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121744764
DNA replication proteins [BR:
sspl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
121744764
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
121744764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
RCF1-5-like_lid
AAA_22
Rad17
AAA_assoc_2
AAA_30
nSTAND3
BRCT_2
AAA_5
AAA_19
AAA_18
RuvB_N
Zeta_toxin
RsgA_GTPase
Sigma54_activ_2
AAA_16
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
121744764
NCBI-ProteinID:
XP_041994326
LinkDB
All DBs
Position
8:complement(1542588..1549011)
Genome browser
AA seq
804 aa
AA seq
DB search
MSQDIRKWFVKPHGIQAGNGNTSKQEKPLTPEKPPVVQEAKESSSRRKTSKYFAKDAQSV
KDEMGVEEVFEKKAQKGSTGSASEKPPSGKKPRKFQISDDDDDFATPTLRKGLVEASPNK
KLKSESGKGVARKIADVIDEDDDQTVKSNAKSAGRGRGRGRGRVAKGSAVTQITVESMDV
DKSDAEEDMDDKDAKPTKPGGRGRGGRGAPAGGRGRGGGGRGGFMNFGERKDPPHKGEKE
VPEGAPDCLNGLTFVISGTLDSLEREEAEDLIKRHGGRCTGSVSKKTNYLLCDEDIGGRK
SEKAKELGTAFLTEDGLFDMILASNKSKKPVAKVAPSPPKKSPQKPEKSKQTGQTVTNSD
TKGSASISPSAKRKNLSTSLPWTEKYRPKVPNDIVGNQSLVKQLHDWLTNWNEQFLDAKN
KGKGKKQNDSGAKKAVLLSGTPGIGKTSSAKLVSQMLGFQTIEVNASDSRGKADGKIERG
IHGSTSNSIKELVNNQSLSLKPGSSQNVKTVLIMDEVDGMSAGDRGGVSDLIASIKISKI
PIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQVAKRLSLIASSEGLQANEIALEELAER
TNGDIRMALNHLQYMSLSMSVIKFDDIKQRLQSNSKDEDISPFTAVDKLFGFNSGKLRMD
ERIDLSMSDPDLVPLLIQENYINYRPSSGGKDDNGMKRLNFIARAAESIGNGDIINVQIR
RYRQWQLFQAGCIASCITPAALLHGQRETLEQGERNFNRFGGWLGKNSTMGKNNRLLEDL
HVHLLASRESNLGRSTLRLDYLIR
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagatataagaaagtggtttgtgaagccacatggtatacaagcaggaaatggc
aacacatcgaagcaagaaaagccattgacacctgagaagcctcctgttgtacaagaagcg
aaagaatcttccagtaggaggaaaacaagtaaatattttgctaaggatgcacagagtgta
aaagatgagatgggggttgaggaagtttttgaaaagaaggcacagaagggcagtacgggg
tcagcaagcgagaagcctccatcagggaaaaaaccccgcaaatttcaaatcagtgatgac
gatgatgattttgccacacctacgttaaggaagggtttagtagaagccagtccaaacaag
aagttgaaaagtgaatctggtaaaggtgttgctcgaaaaatcgctgatgttattgatgaa
gatgatgatcaaacagtaaagtccaatgcaaaatctgctggaaggggtaggggtaggggt
cggggtagggttgcaaaaggttctgcagtgacccaaatcactgtagaaagcatggatgtt
gataagagtgatgcagaagaggacatggatgataaagatgctaaacctacaaaacctggt
gggcgaggccgtggtggaagaggtgcaccagcaggcggaagaggtagaggtggtggagga
agaggtggatttatgaactttggtgagaggaaagatcctcctcataaaggagagaaggaa
gtccccgaaggtgctccagactgtttaaatggtttgacgtttgtgattagtggaacactt
gacagtttagaaagagaagaagctgaggatctgatcaaacgccatggcgggcgttgcact
ggatctgtcagcaaaaagacgaattatcttctatgtgatgaagatattggtggacggaag
tctgagaaggccaaagagcttggtactgcttttctcacggaggatgggttgtttgatatg
attctagcatcaaataaatcaaagaagccagtagctaaggttgctccatctcctcccaag
aagagccctcaaaagcctgaaaaaagtaaacaaacaggccaaactgtgacaaactcagac
acaaaaggatcggcctctatttcaccatctgctaaacgtaaaaacctatctacttcccta
ccatggacagaaaaatataggccgaaggttcctaatgatattgttgggaatcagtctctt
gtaaaacagctccatgattggttgacaaactggaatgaacaattccttgatgccaagaac
aagggaaaaggaaagaaacagaacgattctggtgctaagaaagctgtgcttttgagtggg
acgcctggtattgggaagactagctcagcaaagttggttagtcagatgcttggatttcaa
acaattgaggttaatgctagtgatagtcgtgggaaagctgatggtaaaattgagcgagga
atccatggaagtacttctaactctatcaaagaacttgttaacaatcaatccctgagtctt
aaaccgggaagctctcaaaatgtgaagactgttctcatcatggatgaggttgatggtatg
tctgctggagatagagggggagtttctgatcttattgccagtatcaaaatctcaaaaatt
ccgataatatgcatctgtaatgatcgctacagccagaaacttaagagccttgtgaactac
tgcttgctgcttagctttcggaagccaacaaagcagcaggttgctaaaagattatcactt
atagcaagttcagaagggcttcaagctaatgagattgcacttgaggaacttgcagaaaga
actaatggagatatacgcatggccctcaaccacctgcagtatatgagcctctctatgtct
gtcattaaatttgatgatattaagcaacgccttcaaagtaattcaaaggatgaagatatt
tccccattcacagcggttgataaactgtttggatttaatagtgggaagctgcgaatggat
gagagaattgaccttagcatgagtgatcctgatctggttcctcttcttatccaggagaac
tatatcaattataggccaagttctggtggtaaagatgataatggtatgaaaaggctaaac
ttcattgctcgggctgcagagtccattgggaatggtgatattattaatgtccagatacgg
aggtaccggcagtggcaactctttcaggctggttgtattgcatcttgcatcactcctgca
gccctattgcatggacaaagagagacacttgagcagggggaacgcaatttcaatagattc
ggtggatggctaggaaagaattctacgatggggaagaataacagacttttggaggacctt
catgttcatcttcttgcttctcgcgaatcaaacttaggaaggtcaacattgcgacttgac
tacctgatacgttga
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integrated database retrieval system
