Salvia splendens (scarlet sage): 121744768
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Entry
121744768 CDS
T07627
Name
(RefSeq) nuclear pore complex protein NUP85-like isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121744768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121744768
03036 Chromosome and associated proteins [BR:
sspl03036
]
121744768
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121744768
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121744768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Antimicrobial10
Motif
Other DBs
NCBI-GeneID:
121744768
NCBI-ProteinID:
XP_041994334
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All DBs
Position
8:416158..421817
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AA seq
705 aa
AA seq
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MPAVTSDSGEVNSLSIVPHSLETQTLRVYPLRTRTAPPFWRVSISWGRGSTLRVSLLQPG
GAESDGEVVEVNLTNTERGEISEAERQRIAHGSVTPFALLQSRKNQMDELQYGKTWWVHL
MEYSNEIKSLLGTSKSYITPTIEDPKALLEDVEEPTSLKAAWELVEMFYADKQSQTWIPE
RLLDWLADFDCLLSATQPTVHARLVAFQKALVTIQEVENDPEYWEIMSSALGIGWLDIVV
KMLRLHGSYQLDQVGTREIESGLVEAVAVLISQMPRLRPHISDEKLGECYNTKPEFMKAW
EKWRTQLTKLDCHPFWLQCDHKQTRVGLKNMIQIMLGNANVISNATYHWIELYISHLLYI
RPFTVGLESMYTLAQKCMHLKPITNRHKLMGLLIGILEENTEVVLAECSRSFGPWMITHA
AELLTAGSAQAEMLLHEEQSKIGGICIEELHRLIYAQILSSHALTWNIAPIYLTSCMKQG
LGLLENLLYKQPVQQHQVLSESIEICRLNGIDYVSRHMMKIAGVHYWKHGEKNSAVYWLQ
QAQDEVRLNRIAKHLFDLVGKSVSDESFKQWEGMIDLLGTESKTAGGLEFLKKYRDFRRS
LQQVQDGITTDDARKASEALISLMRNPSTPQQFWLRLLNDSLELLNWKDRPLFNVSQTKL
LLNKLQELSLARLLPGYVDADLPPEAFKSVRLALASNLGRAILEE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgccggcagtgacctcagattccggcgaggtcaactcgctctccatcgttccacactct
ctggagacgcagacgctgagagtctatcctctgcggacgcgcacagcgccgccattctgg
cgcgtctcgatctcctgggggcgtgggagcacgctccgcgtctcactcctgcaacctgga
ggagctgaatccgatggggaagttgtggaagtgaatctcaccaatacggaaagaggagaa
atttccgaagctgagcggcagagaatcgcgcacggctcggtcacgcccttcgcgcttctc
cagagccggaagaatcagatggacgagttgcagtatggcaaaacttggtgggtacattta
atggagtacagcaatgaaattaaatctctccttggtacttcaaagtcatatattacacca
accattgaagacccaaaggcattattggaggatgttgaggagccaacctcattgaaagct
gcctgggagctggtggaaatgttttatgcagataagcaatctcagacctggatccctgaa
cgcctccttgattggttagctgattttgattgtttgttatctgcaactcagccaactgtc
catgcaagacttgtggctttccagaaagcacttgtaaccatacaggaagttgagaatgat
ccagagtattgggaaattatgtcgtctgctttaggcattggctggctagacattgttgta
aaaatgttgcggttgcatggatcttaccagttggaccaggttggaactcgagagattgaa
agtggactcgttgaagcagttgctgttcttatatcgcagatgccacgattgcgtcctcat
atatcagacgaaaaattaggagaatgctacaacaccaaacctgagtttatgaaagcatgg
gagaagtggagaactcaactcactaaactggactgtcatcctttctggcttcagtgtgat
cataaacagaccagagttggacttaaaaacatgattcagataatgctgggaaatgctaat
gttatctcaaacgcaacatatcactggatagagctttacatttctcaccttttgtacatt
aggcctttcactgtgggtttagaaagtatgtataccctagcccagaaatgcatgcattta
aaaccaattaccaatcgacataagttgatgggactcttaattgggattcttgaagaaaat
acagaggttgttctcgctgaatgctcaagatcatttggcccctggatgataacccatgct
gcagagctgctgacagctggaagtgctcaagcagaaatgcttttgcatgaggagcagtct
aagattggaggaatctgcatagaagagcttcatcgactgatttatgctcaaattctatca
tctcatgccttgacatggaatatcgctcctatatatttgacttcatgtatgaagcaaggt
ttgggtttattggaaaatttactgtacaagcagcccgtacagcagcatcaagtgttatcg
gagagcatagagatctgtcgtctcaatggaatagattatgttagtcgccatatgatgaag
atagctggagttcattactggaagcatggagagaaaaattccgctgtgtactggctgcag
caagctcaggatgaagttcgtttaaaccgaattgcgaagcatttatttgatcttgttgga
aaatcagtttctgatgaaagtttcaagcaatgggaaggaatgattgatttgctgggaact
gagtccaaaactgctggcggtcttgagttcttgaaaaagtacagggatttccggcgatct
ctccagcaagttcaggatggaatcacaactgacgatgctagaaaagcttcagaagccctc
atatctctaatgagaaacccttctacacctcaacaattctggcttcgtctgctaaacgac
tcattggaattgctgaactggaaggatcgtcccttgttcaatgtttctcaaaccaagctt
ttgttgaataagttgcaagagctgtcgcttgcacgacttctgccaggctatgttgatgct
gacttgccaccagaggccttcaagtccgtccgactggcccttgcctccaatctcggccgt
gccatccttgaagagtaa
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