Salvia splendens (scarlet sage): 121744780
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Entry
121744780 CDS
T07627
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121744780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121744780
03009 Ribosome biogenesis [BR:
sspl03009
]
121744780
04131 Membrane trafficking [BR:
sspl04131
]
121744780
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspl04147
]
121744780
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
121744780
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
121744780
Membrane trafficking [BR:
sspl04131
]
SNARE
SNARE associated proteins
Others
121744780
Autophagy
Aggrephagy
Other aggrephagy associated proteins
121744780
Exosome [BR:
sspl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121744780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_33
AAA_2
AAA_5
AAA_22
AAA_14
NPHP3_N
TIP49
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
AAA_18
ATPase_2
Parvo_NS1
IstB_IS21
ABC_tran
Viral_helicase1
AAA_7
NB-ARC
NACHT
TsaE
Vps4_C
DUF815
ResIII
AAA_24
AAA_lid_PRS2_C
Zeta_toxin
SLFN-g3_helicase
KAP_NTPase
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
121744780
NCBI-ProteinID:
XP_041994353
LinkDB
All DBs
Position
8:complement(5234477..5238507)
Genome browser
AA seq
807 aa
AA seq
DB search
MTNQADSSDSKGAKKDFSTAILERKKAANRLVVDEAVNDDNSVVSLHPATMEKLQIFRGD
TVLIKGKKRKDTVCIALADDACEEPKIRVNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTIEGLTGDLFDAYLKPYFLEAYRPVRKGDHLLVRGGMRSVEFKVVETDPGEYCV
VAPDTEIFCEGEPIRREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSEDVDLERISKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFHTALGISNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGSVGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPLSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIEREKKRLDN
PDSMEEDETDEVSEITPSHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFPE
ATGGGASGSDPFAAPAGGAADDDDLYS
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaccaagctgactcctccgattcgaaaggtgcgaagaaggacttctcaaccgcg
attttggagaggaagaaggcggccaatcgccttgtcgtcgatgaggcggtcaacgacgac
aactccgtcgtctccctccaccccgctaccatggagaagctccagatttttcgtggagac
actgttttgatcaaggggaagaaaagaaaagatactgtctgcattgcccttgctgatgat
gcatgtgaagagccaaagattagggtgaacaaggttgtcaggtcaaacttgagggttcgg
cttggggatgttgtatctgttcatcagtgtccagatgttaaatacggaaagcgtgtgcac
atactacccatagatgatacgatagaaggtctcactggggatctttttgacgcatatctc
aaaccatactttcttgaagcatatcgccctgtgaggaaaggagaccatcttcttgtgaga
ggtgggatgaggagcgtggaatttaaggttgttgagacagatcctggggaatattgtgtt
gtggctcctgataccgagatcttctgtgaaggggagcctatcaggagagaggatgaagat
agactagatgaagttggctatgacgatgttggtggagttcggaaacagatggctcagatc
cgtgaattagtggagttgccactgagacatcctcagctattcaaatctattggtgtgaag
cctccaaaaggaattctactttatggaccacctggttctggaaagactttgattgctcga
gctgttgctaatgaaactggtgctttctttttcttgattaatggtccagaaattatgtct
aaattggctggagagagtgagagtaatctgagaaaggcatttgaggaggctgagaagaat
gctccatctattattttcattgatgaacttgactcaatagctcctaagagagagaaaaca
catggagaagttgagaggaggattgtttctcaactcctgactctcatggatggtttgaaa
tctcgtgcgcatgttatcgttatgggcgcgactaaccgaccaaacagcattgaccctgct
cttaggaggtttggtaggtttgacagggagatagatattggtgttcctgatgaagttgga
cgcctcgaagttcttaggattcataccaagaacatgaagctttctgaagatgttgattta
gaaagaatctcaaaggacacccatggctatgtcggtgccgatcttgcagctctctgcaca
gaagctgcactacagtgcatcagagagaaaatggatgttatcgacttggaagatgattca
attgatgcagagatactgaactctatggccgtaacaaatgagcacttccatactgctctt
gggataagcaatccatctgctttgcgagagacagtagttgaagtacccaatgtctcttgg
gaagatattggagggcttgaaaatgttaagagggagcttcaggagactgttcaatatcct
gtggaacatccagaaaagtttgagaaatttggcatgtcgccttcaaagggtgttttattc
tatggtcctcctgggtgtggtaagacactgcttgccaaggcaatcgcaaatgaatgtcag
gccaattttatcagtgtgaaagggcctgaactgcttaccatgtggttcggagagagtgaa
gctaatgtccgtgaaatatttgacaaggctagacaatccgctccttgtgttctcttcttt
gacgagcttgactctattgctacccagagaggaggcagtgttggtgatgcaggcggtgct
gctgatagagttctcaaccaacttctcacagagatggatggcatgaatgccaaaaagact
gttttcattattggggccactaacagacctgacataattgatcccgcgcttcttcgccca
ggtcgtcttgatcaattgatatacatccctctgccagatgaggattctcgtcatcaaatc
ttcaaagcctgccttagaaaatcgcccctttccaaagatgtcgatctacgagctctggcc
aagtacactcaaggatttagtggggcagacatcacagagatttgtcagcgggcttgcaaa
tatgccataagagagaacatcgagaaagacatagaaagagagaagaagagattagataat
cctgactcaatggaggaagacgagactgatgaagtgtccgagatcacaccctcacatttt
gaggagtcaatgaaatatgctcgtagaagtgtgagcgatgctgatatacgcaagtaccag
gcctttgcgcagaccttgcagcagtctcgtgggtttgggacagaattcaggtttcctgaa
gccaccgggggtggggcatctggatccgacccatttgcagcccctgccggtggagctgct
gatgacgacgacttatatagttag
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