Salvia splendens (scarlet sage): 121744810
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Entry
121744810 CDS
T07627
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121744810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121744810
03110 Chaperones and folding catalysts [BR:
sspl03110
]
121744810
03029 Mitochondrial biogenesis [BR:
sspl03029
]
121744810
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspl04147
]
121744810
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
121744810
Messenger RNA biogenesis [BR:
sspl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
121744810
Chaperones and folding catalysts [BR:
sspl03110
]
Heat shock proteins
HSP60 / Chaperonin
121744810
Mitochondrial biogenesis [BR:
sspl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
121744810
Exosome [BR:
sspl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121744810
Exosomal proteins of other body fluids (saliva and urine)
121744810
Exosomal proteins of breast cancer cells
121744810
Exosomal proteins of colorectal cancer cells
121744810
Exosomal proteins of bladder cancer cells
121744810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
121744810
NCBI-ProteinID:
XP_041994398
LinkDB
All DBs
Position
8:5178062..5181412
Genome browser
AA seq
589 aa
AA seq
DB search
MASANAISTASILPSSSKQDGLKNRKVNQLLQQGQKQSRNRFVVRANAKEIAFDQKSRSA
MQSGIDKLASAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDAMENAGAALIRE
VASKTNDSAGDGTTTASVLAREIVKLGLLSVTSGANAVAVKKGIDKTVQGLVDELEKKAR
PVKGRDDIKAIASISAGNDETIGTMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEID
RGYISPQFVTNPEKLSVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTG
EALATLVVNKLRGIVNVAAIKAPGFGERRKALLQDIAILTGAEYQATDLGLRVEDTDIDQ
LGVARKITITKDSTTLIADAASKDELQSRIAQLKRELSETDSVYDSEKLAERIAKLSGGV
AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTYVPAIKDKLEDA
DERLGADIIQKALVAPAALIAQNAGVEGEVVVEKVRANEWEFGYNALTDSYENLVESGVI
DPAKVTRCALQNAASVAGMVLTTQAIVVEKAKPKAPVAAGQPPAGSYSV
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcaaatgcaatctctacagcctccatcctcccttcctcctctaagcaggat
ggattgaagaataggaaggtgaaccagttattgcagcaggggcagaagcagtccaggaat
cggtttgttgtgagggccaatgcaaaggagatcgcttttgatcagaaatcgcggtctgca
atgcagtccgggatcgataagctcgccagcgctgtcggccttactcttggtcccagggga
aggaatgttgtcttggatgagtttgggtccccaaaggtggtcaatgatggggtcacaatc
gcacgcgccattgagttgcctgatgctatggaaaatgctggcgctgctttgattagggag
gttgctagcaagacgaatgattctgccggtgatgggactactactgcatctgttcttgca
cgtgaaattgtcaaacttggcctcctcagtgttacatctggtgctaatgcagttgctgta
aagaaaggcattgataaaaccgtgcagggtttggttgatgagctcgaaaagaaggctagg
cctgtcaagggccgggatgatattaaagccattgcctccatctctgctgggaatgatgag
acaattgggacaatgattgctgatgcaattgacaaggttgggccggatggtgttctgtcc
atcgagtcatcctcctcatttgagaccactgttgatgtagaagaaggaatggagattgac
agaggatatatctctccgcaatttgtcacaaaccctgagaagctgagtgttgagtttgag
aatgctagggtattagttacagaccagaagatctcagcaatcaaggacatcattcctttg
ttagagaaaactacccagttaagggcacctttactcattattgctgaagatgtcactgga
gaagctttggcaactctcgttgtaaacaagctccgaggtattgtgaatgtggctgccatc
aaagcccccggattcggagaacggaggaaagcgcttctccaggatattgctattttgact
ggagccgagtatcaagctactgatttgggattgcgcgtggaagacactgatatcgaccag
cttggtgtagctagaaagataaccatcaccaaggactccacaactctaatcgcagatgct
gcatccaaggatgagctgcaatctagaattgctcagcttaaaagggagttgtctgagact
gattctgtttatgactctgagaaacttgctgagagaattgccaagctgtctggtggtgtt
gctgttatcaaagttggtgctgcaacagagactgagcttgaagaccgcaagctccgcatc
gaagatgccaaaaatgcaacatttgctgccattgaggaaggcatcgtgcccggtggcgga
gctgcactggttcatctctcgacttacgtccctgcgatcaaggacaagcttgaagatgcc
gatgagcggcttggtgctgatatcatacaaaaggctttagtagcgccagcagctttgatt
gcccaaaacgctggggtggaaggcgaggtagtcgtggaaaaagtgagggccaatgaatgg
gagtttggttacaacgcgctgactgattcgtacgagaacttggtagaatcgggagtgatc
gacccagctaaggtgacgagatgtgcgctgcaaaatgcagcttcagttgctggaatggtg
ctcaccacacaagccattgtcgtcgagaaagcgaagcctaaagcgccagtcgctgccggg
cagccaccggcaggcagctactcagtctaa
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