Salvia splendens (scarlet sage): 121744852
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Entry
121744852 CDS
T07627
Name
(RefSeq) sister-chromatid cohesion protein 3-like isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sspl03036
]
121744852
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
121744852
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
SCD
STAG
ARM_ECM29_C
EspA
Motif
Other DBs
NCBI-GeneID:
121744852
NCBI-ProteinID:
XP_041994458
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Position
8:7368810..7376998
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AA seq
1134 aa
AA seq
DB search
MEEEPVAPDTATRRSKRTRAEVRQADFTRTDRIEDELEDEREESSDEFQQPRPKPKRNRP
NEGASTSAAASRKADLSLTDVIKGDGKEIPEVVKRWVEHYERNQKSAMAELLTMLFEACG
AKHSILEENIEETDVDDVVVALVNMAKRGEVEDYQSSKRGFKNFKENLVYFWDNLVSECQ
NGPLFDQSLFDRCLDYIIALSCTPPRSYRQIASLMGLQLVTSFINVAKILGPQRETTQRQ
LDAEKKKNIEGPRVESLTKRLSMTHEKITMLEEMMRKIFTGLFVHRYRDIDPDIRMSCIE
SLGVWVLSYPSLFLQDLYLKYLGWTLNDKSSGVRKISVLALQNLYEVDANVPSLNLFTQR
FYRRMLELADDIDISVSVCAIGLVKQLLRHELVPDEELGSFYDLLIDDPPEVRRAIGALV
HDHLIAQKFNNSQSHSTGSDSDSPEVHINRMLKILKEFSADPILSSYVIDDIWDYMGAMK
DWKCIIRMLLADNPSAELDDVDATNLIRLFFSSVRKAVGERIVPTTDNRNPHHTKAQKEM
FENSKRDITVAMMKTYPQLLRKFMPDKDKIAPLVGIIPHMNLELYSLKRQEQNFRAVLKL
IREAFFKHGEKDNLRACVKAIKFCSSESQGELQDFAQNQIKDLEDDLVAKLKSAMKDVMN
GGDEYSLLVNLKRLHELQLMHKVPLDSLYQDLVHILKSFRNIDDEVVSFLFLNMFVHVSW
CLHSILSSETVSETSLSSLIGKRDALLEELDYFLSNSFQLHSDSRSKTQLAYWVCGILAD
TWCLFKRAKFSMTKLEILGYTPDVTVIEKYWRMCEQLLDVSDDAEDEEDEENREYTEETN
ADTVMFALAKLVATDTVAKEHLAPEVISHLGKYGASVTEIVKHLITVLKKKGDISNILLE
ALKKAYQRYLAAISSGDDETSSKQFQECKSLAARLSGPYVGAARNKYKAEILNIVREGIN
FAFSEAPKQLSFLDGAMLPFVSKLPPSDILDIMKGVERRTENVKTDEDPSGWRAYHTFLD
ILREKYLKNEAAKVADGNEGTTVRRRGRPRKQQTLQGKRLFDDQISSEDEDPISGSDQDV
GAEDKEEDDELLIHSLRASSKLRSLRVSKSQTRTVDSNLAAEDLATPKTSGASS
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggagccagttgcgccggatacggctactcgtcgttcgaaaaggactagggct
gaggtcaggcaagccgatttcactcgcacagacagaattgaagacgaattggaggatgag
agggaagaatcttctgatgaatttcaacaacctcgcccgaaacctaagagaaatagacct
aatgaaggtgcttcaacttcagctgcagccagtcgtaaagctgacctcagcttgaccgat
gttatcaaaggtgatgggaaggagattccagaggtagttaaaagatgggttgaacattat
gagaggaaccaaaagtccgcaatggctgaactcttaactatgctgtttgaggcttgtgga
gcaaaacatagtattctagaagagaatattgaagagactgatgttgacgatgtggttgtt
gctctcgttaacatggcgaaaaggggggaagttgaggattatcagagttccaaaaggggc
ttcaagaatttcaaagaaaatcttgtatatttctgggacaatttggtcagtgaatgtcag
aatggaccactgtttgatcaatcattatttgacagatgtttggactacatcattgcgttg
tcatgtactcctcctagaagttatcgtcagattgcatctttgatgggacttcaacttgtc
acatcctttatcaatgtagctaaaatccttggtccgcagagggaaaccactcagagacag
ttagatgctgaaaagaagaagaatattgaaggacctcgagtggagtcgctcactaaaagg
ttatcaatgacacatgagaagataactatgttggaagagatgatgaggaaaatctttact
gggttattcgtgcatcgttaccgagacattgatccagatattcgaatgtcgtgcatcgag
tcacttggcgtgtgggtactatcatatccctcacttttcttgcaggatttatatttaaag
tatcttggatggacattgaatgacaaaagttctggtgttagaaagatttctgtactagca
ttgcaaaatctttatgaggtggatgccaatgtgccatctctgaatcttttcactcagaga
ttctacagaaggatgcttgagctggctgatgatattgacatttctgtttcagtatgtgca
ataggcctcgtaaaacagttgttaagacatgaacttgtgcctgatgaagaactaggttct
ttctacgacttattaattgatgacccacctgaagtccgacgcgccattggagcactagta
catgatcatttgattgctcagaaatttaacaattcacaatctcactcaacaggcagtgac
agtgattctccagaggtccacattaatagaatgctgaagatactcaaagaattctcagct
gatcccattctgagttcatatgtcattgatgatatatgggattacatgggggccatgaaa
gattggaagtgcatcattcgtatgcttctggcagataatccatcagccgagcttgatgat
gtagatgctacaaatttgattaggctcttcttctcatcagttaggaaagcagttggagag
aggattgttcctactactgacaatagaaacccacatcataccaaagctcagaaggaaatg
tttgaaaacagtaagcgcgacataacagttgccatgatgaagacctatccccagctcttg
cgcaaatttatgcctgacaaggacaaaatagctcctttagtaggaattattccccacatg
aatcttgagctttattctcttaagagacaggaacagaacttcagggctgttcttaaactt
ataagagaggcctttttcaagcacggggagaaagataatttgagagcatgtgtgaaggca
attaagttctgttcctctgagagtcaaggggaattgcaagactttgctcaaaatcagatc
aaggatcttgaagatgacttggttgccaaattaaaatcggctatgaaagatgttatgaat
ggtggggatgaatactccttgcttgtaaatctgaaaaggttgcatgaactccagttaatg
cacaaagttcctctagacagcttgtatcaagacctcgtgcatattcttaagagtttcagg
aacatagatgatgaggttgtttctttcttgtttctgaatatgtttgttcatgtctcttgg
tgcctgcactccattctatcaagtgaaacagtttcagagacatctttatcttctctaata
gggaagcgtgatgccttgttggaggaacttgattactttttaagtaactcttttcaactt
catagtgatagtaggtccaaaactcagctggcatattgggtctgtggtattctggcagat
acctggtgtttgtttaaaagggctaaattttctatgacaaagctggaaatattagggtac
actccagatgtgacagttattgaaaagtattggaggatgtgcgagcaactgcttgatgtt
tcagatgatgcagaagatgaagaagatgaagaaaaccgagaatatactgaggagactaat
gcagacacagtcatgtttgctctggccaaattagtggctactgatacagttgctaaggaa
catcttgccccagaggtcatctctcatctggggaagtatggtgctagtgtcactgagata
gttaagcatctaattactgtcttaaagaaaaagggagacatctcaaatattcttctagaa
gccttgaaaaaggcataccagaggtatctggcggcgatttcctctggtgatgatgaaaca
tcaagcaagcaattccaggagtgtaaaagtcttgctgctcgtctgtctgggccgtatgtt
ggtgctgctcgaaacaagtataaagcagaaattttgaatattgtcagagaaggaatcaat
tttgcattttcagaagcaccaaagcagctgtcatttctcgatggtgcaatgctgcctttt
gtgtccaaacttcctccgtctgacatacttgacattatgaaaggagttgagagaagaact
gaaaatgtgaagacagatgaagatccaagtggttggcgtgcttatcacacatttctagac
atccttcgtgagaaatatctgaaaaatgaagcggccaaagttgcagatggaaacgaaggc
acaactgtgaggcgacgtggtcgtccacgcaagcagcagactctacaaggaaaaagactt
tttgatgatcaaatttcaagtgaagatgaagatccgattagtgggtctgatcaggatgta
ggcgctgaagacaaggaagaagatgatgaactactgatacattcacttagagcatcatcc
aagctaagatcattaagggtttctaagagccaaaccagaacagtagacagtaaccttgca
gcagaggacttggcgacccctaaaacttcaggggcatccagttag
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