Salvia splendens (scarlet sage): 121744923
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Entry
121744923 CDS
T07627
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121744923
03015 mRNA surveillance pathway
121744923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121744923
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121744923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
121744923
NCBI-ProteinID:
XP_041994567
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All DBs
Position
8:complement(27222343..27226028)
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AA seq
313 aa
AA seq
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MAKPARGRQASPSGSDSRSSSRSRSRSRSRSRSRSISRSRSRSRSYSRSGSRSTSRSRSR
SKSISSSSPSRSGSSHSPPPRKSTGEAVKRGRSPPPQTKKSSPPPRKASPAPESLVLHVN
QLSRNVNENHLKEIFGNFGEVVNVWLAMDYAVNLPKGFAYVEFKIRADAEKAQLYMDGAQ
IDGKVVRAKFTLPERKKVASPPKAVANTSRRDASKSEDTATDGDRDGGKRTRDASPRRKQ
PSPPRRRSPGPRRGSPRREQDSPPPPRRRADSPPIRRRPPLSPARGRSPSPPRRFRSPPR
SSPRRIRGSPVRR
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacccgcccgcggccgccaggcgtcgccgtcgggatcagattctcgctcttcc
tcccgctctcgttcccgttcccgttcccgttcccgttcccgttccatttctcgctcccgc
tctcgctctcgctcttactccagatcaggctcccgctccacttccaggtcgcgctcccgc
tctaaatccatatcctcctcttctccttctcgtagcggcagctcccacagccctccgccg
cggaaaagcactggtgaagcagttaagagaggtcgctcacctccaccacaaaccaagaaa
tcttccccacctccaaggaaagcttcgcctgctcctgaatctcttgtgctgcatgtgaac
cagcttagtaggaatgttaacgaaaaccacttgaaagaaatatttggtaattttggtgaa
gtggtgaatgtatggcttgcaatggattatgctgttaaccttccaaaaggatttgcatat
gttgagttcaagattagggcagatgctgaaaaggctcagttatatatggatggtgctcaa
atagatggtaaagttgttcgggcaaagttcacattacctgagagaaagaaggttgcttct
cctcccaaagctgtcgccaacacatcaaggagagatgcctcaaaatctgaagacactgct
acggatggtgatagagatggaggaaaacgtacaagagatgcttctcctcgtcgaaagcaa
ccatctcctcctcgaagaagatctcctggaccacgaagaggatctcctagacgagagcaa
gattctccacccccacctcgtcgtagagctgattcccctccaatcaggagaaggcctcca
ctgtctcctgctagaggccgttcaccttctcctccgagacgcttccggtcaccaccaagg
tcatctccaagaagaatacgcggtagtcctgttcgtcggtga
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integrated database retrieval system
