Salvia splendens (scarlet sage): 121745067
Help
Entry
121745067 CDS
T07627
Name
(RefSeq) DDB1- and CUL4-associated factor 13-like
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121745067
04121 Ubiquitin system [BR:
sspl04121
]
121745067
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
90S particles
Other 90S particles
121745067
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
121745067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Sof1
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
NBCH_WD40
Beta-prop_SCAP
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
Beta-prop_Vps41
PROPPIN
VID27
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
121745067
NCBI-ProteinID:
XP_041994767
LinkDB
All DBs
Position
8:33198498..33203258
Genome browser
AA seq
451 aa
AA seq
DB search
MKVKVISRSTDEFTRERSQDLQRVFRNFDPTLRTQEKAVEYVRALNAAKLDKIFARPFIG
AMDGHIDAVSAMAKNPANLKWLFSGSMDGDIRLWDLATRQTVCQFPGHQGAVRGLTASTD
GRVLVSCGTDSTVRLWNVPLPSHAQDDSSDNEAKPLATYVWKSAFWGVDHQENGELFATA
GAQVDIWNHNRSQPINTFEWGKDTAISVRFNPGEPNVLATSGSDRSITIYDLRLSSPARK
IIMQTKTNSIAWNPMEPMNFTAANEDCNCYSYDVRKMNEARCVHRDHVSAVMDIDYSPTG
REFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKFSNDGSYIISGSDDTNLRLWKA
KASEQLGVLLPRELKNHEYLEAVKNRYKHLPEVKRIVRHRHLPKPIYKAASLRRIMTDAQ
RKKDERRRAHSAPGSIINKPLRKRRIIKEVE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaaagtaatttctcgctctaccgatgaattcacccgagaacgaagtcaggac
cttcagagggtgttccgcaactttgatcctacccttcgcacccaagagaaagcagtcgag
tatgttcgcgctcttaatgcagctaaattagataagatatttgcacgtcctttcattggg
gccatggatgggcacattgatgcggtctcggcaatggctaagaacccagctaatttgaag
tggcttttttcggggtctatggatggagatattcgtctgtgggatttggctactaggcag
acagtatgccagtttcctggtcaccaaggggctgtacggggtctgacagcatcaacagat
ggtcgtgttcttgtttcatgtgggactgattccactgtcaggctctggaatgttcccctt
ccttctcacgcccaagatgattcatcggataacgaagccaagccactagcaacctatgtt
tggaaaagtgccttctggggtgttgatcaccaagagaatggggaactttttgccacagct
ggagctcaagtagacatatggaaccacaacaggtctcagccaatcaacacttttgaatgg
ggcaaagatacagctatatctgtgcggtttaatccaggagaaccaaatgtattagcaaca
tcaggcagtgatcgaagcattactatatatgatttacggctttcttctcctgcaagaaag
attattatgcagacaaaaacaaattccatagcatggaacccaatggagcctatgaacttt
acagctgcaaatgaagattgcaattgctatagttatgatgttcgaaaaatgaatgaggca
agatgtgtgcaccgagatcatgtttctgcagtaatggatattgattattcaccaactggc
cgcgagtttgtaactggatcttatgatagaactgtcagaatattccaatataatggcggt
cacagccgagaaatatatcatactaagagaatgcaaagggtcttttgtgttaagttcagc
aatgacggaagctatattatctccggtagtgatgacacaaaccttcgactttggaaggcc
aaagcatctgagcaactgggagttcttttgccgagagagcttaaaaaccatgaatacttg
gaggctgttaagaatcgctacaagcatcttcctgaggtcaagcgcatagtcaggcacagg
cacttgcccaagccaatctataaagcagcttctctgcggcgcatcatgactgatgcccag
agaaagaaagacgagaggaggagagctcacagcgccccgggcagtatcatcaacaagcca
ttgcgtaaaagaagaatcatcaaagaagtcgaatga
DBGET
integrated database retrieval system
