Salvia splendens (scarlet sage): 121745167
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Entry
121745167 CDS
T07627
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121745167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121745167
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
121745167
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_Prp19
WDR55
WD40_CDC20-Fz
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_DCAF4
DUF7165
Motif
Other DBs
NCBI-GeneID:
121745167
NCBI-ProteinID:
XP_041994901
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Position
8:complement(25089869..25094238)
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AA seq
572 aa
AA seq
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MSLISQNAVPKEAEKEKLRLMGKDKIEIVEERGEEEEVVDGDRIIIDPTRNKKRKKGRKE
DDDEQLEIEEGKQRKKLERFLFSSLYSPIGFGNDDDEEAIGEVDNSSAVFFTDRSADSTL
SVYEEGIESGDETPDTQRNSERKPVWVDDEEKKTSINIAKFNKLRKLRKGEDESVIPGEA
YEARLRAQHMKMNRGTDWARPNAQPVCSSEDDDSDRENGVVVASGYEHPEYADDILMTNE
GLVLKRSVKLLAGLLEYSRLSDANMKDPSQGPVNSVQFHKNAQLLLVGGLDRTLKFFQVD
GKKNEMIQSIFLEDCPIRKAAFLPDGSQAIISGRRKFAYAFDLVKSHVDKICPFAGRDEK
SLESFEVSPDSKTIAFVGNEGYILLVSSKTKELIGTLKMNGSVRSVAFTNDGQQLLSSGG
DGQIYHWDLRTRSCFHKGVDEGCLTGTALSVPPVGNLFAAGSDSGIVNIYNRDDFIGGKR
KPIKVIENLTTKVDFMKFNPDAKILAIGSRLKKNSMKLVHVPSLTVFSNWPPPNKAVHYP
SCMDFSPHGGFVAVGNAAGKVLLYKLHHYTRA
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgagcttaatttctcaaaatgctgtacctaaggaggcagagaaggaaaaattgaggttg
atggggaaagacaagattgaaattgttgaagaaaggggtgaagaagaagaagttgtagat
ggagacaggattatcatagatcctacaaggaataagaagagaaagaaaggacgaaaggag
gatgatgacgagcaattggaaatcgaggaggggaagcagagaaagaagctcgaaagattt
ctgtttagctccttgtactcaccgattgggttcgggaatgatgatgatgaagaagctatt
ggggaggtggacaacagctccgcggtgtttttcactgatagatctgcagatagtacattg
tctgtgtacgaggagggtatcgagtctggagatgagactcctgatacgcagaggaacagt
gaaagaaaacccgtgtgggttgatgatgaagagaagaagactagtataaacattgctaaa
ttcaacaaactgaggaagctgaggaaaggagaagatgaaagtgtaattcctggcgaagcg
tatgaggcaagattgagagctcagcatatgaagatgaaccgaggtactgactgggcacgt
cccaatgctcagccagtgtgcagttctgaagatgacgattctgacagagaaaatggagtg
gtggtagccagtggttatgaacatccagaatatgccgatgatatcctcatgacaaatgaa
ggtcttgttttaaagaggagtgtgaagttattggcggggcttcttgaatactcgagactg
tcagatgctaatatgaaggacccttcacaaggtcccgttaattccgtccagttccacaag
aatgcgcagttgctccttgttggtggattggatagaactttgaagttctttcaagtagat
gggaagaaaaatgagatgatacagagcattttccttgaagactgtcctattcgaaaggct
gcattcttacctgatggatcacaggccatcatatcaggaaggaggaagtttgcttatgca
tttgatttagtcaaatctcatgtagataagatatgcccttttgcaggaagggatgagaag
agcttggaatcttttgaggtcagccctgattctaaaaccatcgcctttgttggaaacgaa
ggatacattctgttagtgtcatcaaagacgaaagaactgatcggaacactgaagatgaat
ggaagtgttagatccgtggcattcactaatgatgggcaacaattgttgagttccgggggt
gatgggcagatttatcactgggatctgaggactaggtcgtgcttccacaagggcgtggat
gaaggttgcctgacaggcacagctctgtccgtcccccctgttggaaatttatttgcggca
ggttcagacagtgggattgtgaacatctacaaccgagacgatttcataggtgggaagagg
aaacctattaaagttattgagaacttgactacgaaggtggatttcatgaaatttaatcca
gatgcaaaaattctggccatcggttctcgcttgaaaaagaatagcatgaagctggttcac
gtcccgtctttaactgtgttctcaaactggccgcctcctaataaggccgtgcactatccg
agctgtatggatttcagcccacacggaggtttcgtggctgtgggaaatgctgctggaaaa
gtcttgttatacaagttgcatcactatactcgggcttag
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