Salvia splendens (scarlet sage): 121745178
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Entry
121745178 CDS
T07627
Name
(RefSeq) protein argonaute 5-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121745178
03036 Chromosome and associated proteins [BR:
sspl03036
]
121745178
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121745178
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121745178
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
121745178
microRNA pathway
RISC loading complex
121745178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
121745178
NCBI-ProteinID:
XP_041994917
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All DBs
Position
8:2285582..2291537
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AA seq
973 aa
AA seq
DB search
MSGRGGRSGGGGGGRGRGRIGGGRGPPDAGRGQQAARGGGGPGRGGAGGYKAPPQSVVAA
PSQPSRPEPAASLSHEMEQKLTLKASSSQTPQTQRPPAAAANPPPVQPELPPASSKAVRY
PQRPGFGSCGRKVVVKANHFLTEIVNRDLRHYDVSISPEVTSKKVCRAIMNQLVTNYKDS
HLGKRMLAYDGRKSCYAAGELPFESKDFVVELNSGDSQSRRERKFKVSIKFAAKVDLHHL
QQFIRGRQLDLPQETLQLYDVVLRENPSNSCAVVGRSFFSPMLGDIGELGNGLMYWKGFY
QSLRPTQMGLSLNIDMSARAFFEPIWVSQYVQKHINKDLSWGLSDQDRIKVKKALKGVRV
ETQHLGQIRRHKISGITTMSSRQLMFSMDGMEAQISVAQYFSQQYNISLDYPNLPAIQAG
SDTKPIYLPMELCKIVEGQRFSRKLNERQVTALLKATCQRPKDRESSILQMVRKNDYNND
KLVNEQFGINVRSEMVSVDARVLPPPMLKYHETGKNSLVTPSVGQWNMIDKKMVNGGKVE
FWACINFSRMHSNHAGQFCDDLIEMCCSRGMEFNRRPLVPVRNAHGPIEKALIDLETESS
KAGKQLQLLIVILPEMTGSYGMIKRVCETELGIVSQCCLPKNVSKPGKQYMQYLENVSLK
INAKAGGRNSVLEMAVKGKFPYLSDRPTIIFGADVTHPLPGEDSSPSIAAVVASTDWPEV
TKYRALISTQAHREEIIQDLYNKREDPKRGVIHGGMIREHLVAFYKSTKLKPHRLIFYRD
GVSEGQFSQVLLHEMEAIRKACNSIEENYMPRVTFIVVQKRHHTRLFAANHNDRNNTDRS
GNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPTHYHVLYDENAFTADGLQMLTYSLC
YTYARCTRSVSLVPPAYYAHLAAFRARYYIEGTDFSDSGSASDAGRGATRERNREVGPLP
KIKDNVKDVMFYI
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaagaggaggccgatcaggaggcggagggggaggccggggacgcggtcgcatc
ggaggcggaagaggaccaccagacgccggtcgaggccagcaggcggcgcgcggcggcggg
ggaccaggtcgcggcggagccggtggctacaaagcgccaccgcaatcagtcgttgcggcg
ccttctcagccgtcgcggccggagccggcggcgtcgttgtctcacgaaatggagcaaaag
cttacgctgaaggcatcttcatcacagactcctcagacgcagagacctccggcggcggcg
gcgaatcctccgccggttcagccggaattgcctccggcttcgtccaaggcggtcaggtat
ccgcagaggcctggatttggaagctgcggccggaaagtggtggtgaaggcgaatcacttc
ctcacggagatcgtaaacagagatctgcgccattacgatgtttcaatatcgcctgaagtg
acatctaagaaggtgtgtagagcgatcatgaatcagcttgttacaaactataaagactcg
catctagggaagaggatgctcgcatacgatggaagaaaaagttgctacgctgctggcgag
ttgccttttgaatcaaaagattttgtggtcgagctaaacagtggtgatagtcagtcgagg
agagagcgcaagttcaaagtgtcgatcaaattcgctgccaaagtagacctgcatcaccta
cagcaattcatacggggcagacaactggatctgccacaggaaaccctgcaattatatgat
gtggttttgagggagaatccttctaacagctgcgcagtggttgggaggtcatttttctcg
cctatgctgggtgatataggagagttaggaaatggtctaatgtattggaaaggcttctat
caaagtcttcgccctactcagatgggcctgtctctcaacattgatatgtctgctagggca
ttctttgaacctatttgggtctcgcaatatgttcaaaaacatatcaacaaagatctgtcc
tggggtttatctgaccaagatcgcataaaggtcaaaaaagctttaaagggtgtacgggtg
gagacccaacatctaggtcaaatcagacgccataagatttcaggcatcacaaccatgtcc
tcccggcagttgatgttttccatggatggaatggaagctcagatctcagttgcacaatac
ttcagtcagcagtacaatatttctctagactatccaaatttgccagcgattcaggcaggc
agtgacactaaacccatttatcttccaatggagctttgtaagattgttgagggtcagcga
ttctctagaaaattgaatgaaagacaagttactgcactattgaaggcgacatgccaacgc
cccaaggatagagaaagttcaatcctccagatggttcgtaaaaatgattacaacaatgat
aagcttgtgaacgaacaatttggcattaatgttaggtctgagatggtatctgtagatgca
cgggtgttgcctccgcctatgctgaaatatcacgagactggtaaaaatagtctggtaact
ccaagtgtagggcagtggaacatgattgacaagaaaatggttaatggaggaaaggttgag
ttctgggcttgcatcaacttctcaaggatgcatagtaaccatgctggccaattttgtgat
gatttgattgagatgtgttgcagtagagggatggaatttaatcgaagacctctagttcct
gttcgcaatgcgcatggcccgatcgagaaggccttgattgatcttgagaccgagagttcc
aaggctggaaaacaactccagttgctcattgtcattttgcctgaaatgactggatcatat
gggatgataaagcgagtttgtgaaacggagttgggtattgtctcacagtgctgtctaccg
aagaatgtatcgaaacccgggaaacaatatatgcaatacttggagaatgtctcccttaaa
ataaatgcaaaggctggaggtcgaaacagcgtgttggagatggccgtgaagggaaagttt
ccatatctcagtgatcgacccactattatattcggagcagatgttactcatcctctacca
ggagaggattcgagtccctctatagctgcggttgttgcttcaactgactggcccgaagta
acgaagtatagagcactcatttctacacaggctcacagggaagaaatcattcaggatctt
tacaacaagcgagaggatcctaaaaggggagtaatccatggtggaatgattagagagcat
ttggtggctttctacaaatccactaagcttaaacctcacaggctcatattctacagggat
ggggttagtgaaggacaattcagtcaggtccttcttcatgaaatggaggcaataaggaag
gcttgcaactctattgaggaaaattacatgccaagggtcacttttatcgtcgtgcaaaag
aggcatcatacacgtctttttgctgctaatcacaatgataggaataacaccgataggagc
ggcaacattcttcctggcaccgttgtcgacacaaagatatgccacccaactgagttcgat
ttctacctctgtagccatgctggcatccagggtacaagccgccccacccactaccatgtc
ctctatgatgagaacgcgttcacagccgatggtctgcaaatgctgacatacagcttgtgc
tatacgtatgccagatgtactcgctcggtgtccctagttccaccagcgtactatgcgcat
ctagctgctttccgagctcgttactatattgaaggcaccgacttctctgacagtggatcg
gcttctgatgctggtcggggtgctactcgggagaggaacagagaggttggacctctgcca
aagatcaaagacaatgtgaaggatgtgatgttttacatctga
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