Salvia splendens (scarlet sage): 121745251
Help
Entry
121745251 CDS
T07627
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121745251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121745251
Enzymes [BR:
sspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121745251
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
U-box type E3
121745251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
Neurochondrin
MLKL_N
HEAT_2
zf-RING_UBOX
zf-C3HC4_4
zf-Nse
KAP
Arm_2
zf-C3HC4_2
MCAfunc
RPW8
zf-C3HC4
zf-RING_2
BORCS6
HEAT_EZ
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
121745251
NCBI-ProteinID:
XP_041995012
LinkDB
All DBs
Position
8:complement(4514535..4520576)
Genome browser
AA seq
662 aa
AA seq
DB search
MEEDDKAALSRKLIDLVGEISAFSDYRASVKRQYTNLARRLKLLTPMFEEIRDCKEALSE
DSIRALAELAGALESAKELLRFGSEGSKIYLVLERDQIMNRFHEVTAELERALSGISFEK
LDISDEVKEQVELVLAQFLRAKGRVDAPDSELYEDLMCIYNKNNDAGEDTDVLRRLVDRL
QLSDIADLTQESLALHEMVGATGGDPEESIEKMSMLLKKVKEFVQSTNPNIDSTTTENST
PTSSGGKVLTNQKSLVIPNDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEAGHSTCPN
TQQALTSNALTPNYVLRSLIAQWCEANGIEVPKRPGSSRPKAGSACSPAERSKIGALLCK
LTSGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVQLLSTPDSRTQEHAVTALLN
LSIFEDNKGSIISSGAVPGIVHVLKKGSMEARENAAATLFSLSVIDENKVTIGASGAIPA
LVALLSEGTQRGKKDAATALFNLCIYQGNKGKAVRARVIPTLMRLLTEPQGTMVDEALAI
LAILSSHPEGKSAIGAAEAVPVLVDVIGNGSARNKENSAAVLVHLCSGDQQYLAEAQELG
VMGPLLELAQHGTERGKRKATQLLERMNRFVETQKAARAAQAENQTQNQASQPPSSGNAE
MS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggacgacaaggccgcgctgtctcggaagctgatcgatctggttggcgaaatc
tcggccttctccgactacagagcctccgtgaagaggcagtacaccaatctagctcggcgg
ctgaagctgttgaccccaatgttcgaagagattcgcgattgcaaggaggcgctgtccgag
gattcgatcagagcgctggcggagctcgcaggcgcgctggaatcggccaaggagttgctc
cgctttggcagcgaggggagtaagatttatctggtcttagagagagatcaaatcatgaat
agatttcatgaagtgacagctgagttggagcgagctctaagtggcatttcttttgagaaa
cttgacatatcagatgaagttaaggaacaggttgagcttgttctcgctcagttcctaaga
gccaagggaagggtagatgcaccagattctgagctgtatgaggatctgatgtgtatttac
aacaagaataatgacgccggagaagatacagatgtattaaggaggttggttgacagacta
cagcttagtgatattgctgacttaacccaagaatcactagctttgcatgagatggttgga
gccactggtggagacccagaggagagcatagagaagatgtcaatgctgttaaaaaaagtt
aaggaatttgtgcagtcaacaaatccgaatattgattccaccacaactgagaattctacc
ccaacaagtagtggtggaaaagtactgacaaatcagaagagccttgttataccaaatgac
tttcgatgtcctatctccttagagttgatgaaggatcctgtcattgtctcaacaggacag
acatatgaaaggtcgtgtatcgagaaatggctggaagcagggcatagtacctgtcccaac
acacagcaagctctcactagcaatgctctaacaccaaattacgttcttcgaagtctcata
gctcaatggtgcgaagcaaatggcattgaagtacccaagagaccgggcagctctcgcccc
aaggctggatctgcatgctcccctgcagagcgttccaagataggagcccttctctgtaag
cttacatccggcaaccctgaagatcaacggtctgcagcaggtgaaatccgtctccttgca
aagcgtaatgctgacaaccgtgtggctatagctgaagctggcgccatccccttgcttgtc
cagcttttatcgactcctgattcccgcacacaggagcatgctgttactgcccttctcaac
ctttccatattcgaagataacaagggaagcataatatcctctggtgccgtgcctggtata
gtgcacgtgctcaagaaagggagcatggaagcgcgggaaaatgctgctgccacactgttt
agcctctcggtgattgacgaaaacaaggtaactatcggtgcttcaggggcaattcctgca
ttggtggcgctcctcagtgaaggcacccaaagggggaagaaagatgccgcaacagcgctc
ttcaacttgtgcatataccaaggcaacaagggtaaggccgtgagggcgcgcgtcattccc
acattgatgcgactgctcaccgagcctcaaggcaccatggtggacgaagcgctcgcgatt
ctggcgatactgtccagccaccccgaaggaaagtcagccattggagctgccgaggcagta
cccgttttggtggatgtcatcggcaacggctcagccaggaataaagagaactctgccgcc
gtgctggtgcacctgtgctcgggcgaccagcaataccttgccgaggcccaggaactcggt
gtgatggggccactgcttgaattggcgcagcatgggacggagaggggcaagaggaaagcc
acccagctgctcgagcggatgaacagattcgtagagacacagaaggcagcacgggcagcg
caggcggagaatcaaacacagaatcaggcgtcccaaccgccgtcgtccggtaacgctgag
atgagttga
DBGET
integrated database retrieval system
