KEGG   Salvia splendens (scarlet sage): 121745297
Entry
121745297         CDS       T07627                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121745297
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sspl03041]
    121745297
Spliceosome [BR:sspl03041]
 Complex A
  U2 snRNP components
   U2 related factors
    121745297
 Complex B
    121745297
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 Autophagy_act_C zf-CCCH_4
Other DBs
NCBI-GeneID: 121745297
NCBI-ProteinID: XP_041995076
LinkDB
Position
8:5532537..5535669
AA seq 312 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP
GVDAQGQPIDPKKMQEHFEDFYEDLFEELNKYGEIESLNVCDNLADHMVGNVYVQFREEE
HAANALQNLTGRFYAGRPIIVDFSPVTDFREATCRQYEEDACNRGGYCNFMHLKRINREL
RHQLFGRRRSRHSRSRSRSPYRHRSYDDRSHESRSHSRRYDDHDRHESRSRRRKSTSPRS
RRGRSRSPGGRRNRSPVREGSEERRAKIAQWNREKEETERSGNKANAGDEDRRAKNDHSG
NIDNGGHNEPTQ
NT seq 939 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcgtcaattttcggtacagagaaggacagagttaactgcccattc
tacttcaagatcggcgcgtgcaggcacggcgaccgctgctcccgcctccacaccaagccg
agcatcagccccaccatccttctttccaacatgtaccagcgccccgacatgattactcct
ggcgtcgacgctcagggccagccgatcgaccccaaaaaaatgcaggaacacttcgaggac
ttttatgaagatttatttgaggagttaaacaaatatggagagattgaaagcttgaatgtt
tgtgacaatttagctgatcatatggttggcaatgtttatgtccaatttagggaggaagag
catgctgctaatgctcttcaaaacctgactgggcggttctatgcaggacgccccatcatt
gttgatttctccccagtgactgattttcgtgaagccacctgtaggcagtatgaggaggac
gcatgtaaccgtggtggctactgtaacttcatgcatctgaaaaggatcaacagggagttg
aggcaccaattatttgggaggcgtaggagtagacacagccgtagtaggagcaggagtccc
tatcggcaccgtagctatgatgaccgctcacatgagagtcggagtcacagcagaaggtat
gatgaccacgatcgccatgaaagtcgaagcaggaggcgcaagagcacaagtccaagaagt
agaaggggtagaagccgaagtccaggtggcaggaggaatcgtagtcctgttagggaaggt
agtgaagagagacgtgctaaaattgcacagtggaatagggagaaggaagaaacagaacgt
tctggcaacaaggcaaatgctggtgatgaggatcgtagggctaaaaatgaccactctggc
aatatagacaacggaggacacaatgaaccgacacagtag

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