Salvia splendens (scarlet sage): 121745405
Help
Entry
121745405 CDS
T07627
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121745405
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sspl01009
]
121745405
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121745405
03036 Chromosome and associated proteins [BR:
sspl03036
]
121745405
Protein phosphatases and associated proteins [BR:
sspl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121745405
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121745405
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121745405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_8
EF-hand_1
EF-hand_5
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
121745405
NCBI-ProteinID:
XP_041995233
LinkDB
All DBs
Position
8:complement(18152432..18162491)
Genome browser
AA seq
535 aa
AA seq
DB search
MDLDFNGDITCLDAELLQIQDVSALAIKANPFVAEKLFDQWLSLPETNSLVKSLLNKAKG
GGPLNASGTASTNTAASNTLPSMFPSGSSTPPLSPRSSGSPRLIKQRTGPSALGLKSVNE
PVKELIPQFYFQNGRPPPNEMKERCLFRINQFFYGHVDGLQIHEFKPVTKEICKLPSFFS
SVLFKKIDTEGAGIVTRDAFVDYWINRMLTKDLATQLFTILKQPENRHLVQDDFKPVLRE
LLTTHPGLEFLQGTPEFQERYAETVIYRIFYYGNRAGNNRLTLKELRRSNLIAAMQHADE
EEDINKVLRYFSYEHFYVIYCKFWELDSDHDFLIDKENLIRYGNHALTYRIVDRIFSQVP
RKFTSKVERKMGYEDFVYFILSEEDKSSDLSLEYWFKCIDLDGNGIITRNEMQFFYEEQL
HRMECMAQEPVLFEDILCQIVDMVHPEDESYFTLRDIKGSRLSGSVFSILFNLNKFMAFE
SRDPFLIRQERENPNLTEWDRFAHREYIRLSMEEDAEDASNGSGDNWDEPLEAPF
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggatttggattttaatggagatatcacgtgcctcgatgctgaactattgcaaattcag
gatgtgtcggcgttggcaattaaagccaatccatttgttgccgaaaagctatttgatcag
tggctttcgcttcctgaaacaaattccttggtaaaatcgttgctcaataaagctaaggga
ggtggcccgttgaatgcttctggaacagcaagcacaaatactgcagctagcaatacattg
ccttctatgtttccttcaggtagtagtacaccaccactatcacccaggagttcaggttct
cctcgactcatcaaacagaggacaggtccttctgccttaggcttgaaatcagtgaatgag
cctgtgaaagagcttatacctcagttctatttccaaaatggtcggccaccacctaatgaa
atgaaagagcggtgcttgtttagaatcaaccaatttttttatggtcatgtggatggactg
caaatacatgaatttaaaccagtgacgaaggaaatttgcaagctcccgtctttcttttct
tctgtactgtttaaaaagattgatactgagggtgctggaattgtgaccagagatgcattt
gttgattattggattaatagaatgttaaccaaggatctggctacacagttatttacaatc
ttgaagcagccagagaacaggcacttggtccaggatgactttaaacctgttcttcgagaa
cttttaaccactcatcctgggctggaattcctacagggtacgcctgaatttcaagaaaga
tatgctgaaactgtaatatacagaatattttactatgggaatagagcgggtaataatcgt
cttacactaaaagagctgagacgctcaaacttgattgccgcaatgcagcatgcagatgaa
gaagaggatattaataaagtcttgaggtacttctcatatgagcatttttatgtgatatac
tgcaagttctgggaactggactcggatcatgattttttgattgacaaagaaaacctcatc
agatatggtaaccacgcactaacctacaggattgttgatagaatattttctcaggttccg
agaaagttcaccagtaaggttgaacgaaagatgggctatgaagatttcgtctacttcata
ttgtcagaggaggataaatcatctgaccttagtcttgagtattggttcaagtgcatagat
ttggatggtaatggaattataacgaggaatgaaatgcaattcttttatgaggagcagttg
catagaatggaatgcatggcccaagagcctgtgcttttcgaagatatattgtgtcaaatt
gtggacatggttcatccagaggatgagagctattttacgctgcgagatataaaaggaagc
agactttctggcagtgttttcagtatcctgtttaaccttaataagtttatggctttcgag
tctcgtgatccttttctaattcggcaggagcgcgagaacccaaatttgacagagtgggat
cgatttgctcaccgggaatatattaggctctcaatggaggaagatgcagaagatgcctct
aatggaagtggagataattgggatgaaccactcgaggctcctttttga
DBGET
integrated database retrieval system
