Salvia splendens (scarlet sage): 121745432
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Entry
121745432 CDS
T07627
Name
(RefSeq) PH-interacting protein-like isoform X1
KO
K11797
PH-interacting protein
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121745432
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
121745432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Bromodomain
Beta-prop_DCAF4
VPS8_N
WD40_MABP1-WDR62_1st
WD_LRWD1
Beta-prop_HPS5
Auxin_resp
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
121745432
NCBI-ProteinID:
XP_041995271
LinkDB
All DBs
Position
8:complement(6440232..6451659)
Genome browser
AA seq
1629 aa
AA seq
DB search
MDCRKYTCAGNAPSMNLGTISFPSKAHDKQQMKDHEEAADCAASMDIDVDLREIYFLIMH
FLSSGPCHKTFGQFHEELLEHELLPRRYHGCYSRDATCRDENDDGKSFPLTYENLIRRYS
HIEKDHLVKLLKQLMLLASPPLRSMVGKVAPSAADVPTLLGSESFSLLSGEKNKTNKPAK
NLPSFLRWPHMQADQVRGLSLREIGGGFSKHHRAPSIRVACYAIAKPSSMVPKMQNIKKL
RGHRDAVYCAIFDRSGRYVITGSDDRLVKVWSMETALCLASCRGHEGDITDLSVCSNNTL
VASASNDFTIRVWRLPDGYPISVLRGHTGAVTAIAFSPRPNTTYHLLSSSDDGTCRLWDG
RYSHTRPRVYIPKPTDALALTGGSSLPPPSTLSSTALPCHQILCCAFNANGAVFVTGSSD
TYARVWSACKTSTDDPDQVCHEIDILAGHENDVNYVQFSGCAVASRSSPSDSFIEDNIPK
FKNSWSNHDNIVTCSRDGSAIIWVPRSRRSNGKLGRWIRAYHLKVPPPPMAPQPPRGGPR
QRLLPTPRGVNMIMWSLDNRFVLAAIMDNRICVWNASDGSLVHSLAGHTASTYVLDVHPF
NPRIAMSAGYDGKTILWDIWEGTPIRVYEIGGRFKLVDGKFSLDGTSIVLSDDVGQIYLL
NTGEGESQKDAKYDQFFLGDYRPLAQDTHGNVVDQETQLVPYMRNIQDPLCDSSMLPYPE
PYQSTYQQRRLGALGIEWRPSSIKFAIGTDIGIGQEFQILPLPDLDVVLEPLPDYVDAMF
WEPENDIIHDDNDSEYNVTEENFSDEQICPSDGNSSDSACSEEDEIRENPRDSMRRSKRK
KSFLEVEHRTSTDRRGKKRVPDEKEGTSSRSKRYKKSKISLRTSRRKSTKSKSSRPQRVA
ARNAIPETTTDEDGEDGSTGETSDSESPSLDGLAIQSKEQSDNLMNVQREYMTSSHKSEE
LVKPCLNHPDSQINVGNKKKLVLKFSLPHRKPPVLSGNLESETTIASSTSRGCEENPKED
RVNAMPGNLASSSVIVIDKEWSEDHKRQPGGNERATEASAVSDNKVNLGKFETGSSNGTQ
LGGYDVHDVRTNGSLQVDNGYDVFNRQYGVVETDLSTSDLHGSNSLTIDAKPTSEPQNKS
KRKLTIIKIKTKKVPGESPSRLPGLNRADGSTGAAVESTSKIVEEEPAFRVLTTDNFSDE
PNHSPYVHGDGFDDSTHVNPYYEEAEYELPDLATDSARRARSSRLKATSLENGFANHTSA
MGVDYLQPGTSRSAERSSKRTAENCPSWGYKHAGRPKSSSSNKRESHYRGDTSSSVEKNK
NQMLKKTNWLLLSEQEEGFRYIPQLGDEVVYLRQGHQEYLEHSGTQQRGPWLRYREEVRA
VEICVVEELKYVPCPGSGESCCEITLRFVDASCSVVGQKFSLTLPELDFPDFIVVRSRYE
AAVGRSWTTRDKCLVWWRDESEQGGTWWEGCIVAIKDKSSDFPGSPWERYHVKYKNDDVA
DPHRHCPWELHDPDRLYDPPRICFESKEKILSSLTKLLQKASRDKDKYGIIKLSEIAQKS
DFVNRFVVPLSPELIKSRIENDYYRNTKAVEHDVEVMIENAGLYFPRNPKIMKKMNRLSN
WSADIFSDL
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atggattgcaggaaatatacatgtgctggcaatgcaccttctatgaatctgggcaccata
agtttcccaagtaaggcacatgataaacaacaaatgaaagatcacgaggaagctgcagat
tgtgctgcttccatggatattgatgttgacctccgtgaaatttattttctgatcatgcat
tttctatcttctgggccatgccataaaacatttgggcaatttcacgaggaacttctggaa
catgagctcttacctagaagatatcatggctgttattcaagagatgcaacctgcagggat
gaaaatgatgatggaaaatcttttcctttaacttatgagaatttgattagaaggtactct
cacattgaaaaggatcacttggttaagcttcttaaacagctgatgctgttggcatctcct
ccgttacggagtatggttggaaaagttgctccaagtgctgcagatgtgccaacactactc
ggaagcgagtcattctctttgttgtctggtgagaaaaacaaaacaaataagccagcgaag
aatttgccatcttttctgcgctggcctcacatgcaagctgatcaggttcgagggcttagc
ttgagagaaattggaggaggcttttcaaaacatcaccgcgctccatctatacgtgttgca
tgctatgccattgccaaaccatcatctatggtgccaaagatgcaaaatataaagaagtta
agaggacacagggatgctgtgtattgtgcaatatttgatcgctctggtcgctatgtgatt
actggatcagatgatcgcttggtaaaggtttggtcaatggaaactgcattgtgcctagct
agttgccgtggacatgaaggagacattactgatttgtctgtctgttccaataatacgtta
gtggcatcagcatcaaatgatttcactatccgagtttggcgtctcccagatgggtaccct
atttcagttcttcggggacatactggagctgttactgcaattgcctttagtcccaggcct
aataccacttatcatctcttatcgtcatctgatgatggaacatgtcgattatgggatggt
agatactcccatactcgtcctcgtgtttacatcccaaagcccacagatgctcttgctctt
actggaggtagcagtttgcctccacctagtacgttgtcgagcactgctttgccttgccat
caaatactgtgttgtgcattcaacgccaatggggcagtctttgttacagggagctctgat
acttatgcaagggtttggagtgcttgtaaaacaagcacagatgatcctgatcaagtatgt
catgaaattgacatactagctggccatgagaatgatgtcaactatgttcagttcagtggc
tgtgctgtggcttcgagatcttctccatctgattccttcatcgaggacaacatcccaaag
tttaaaaattcctggtctaatcatgataacatcgttacctgttcacgcgatggtagtgca
atcatatgggtacccagatcacgaagatctaatggaaaacttggacgttggattcgggca
taccatcttaaagttcctcctccacccatggctccccaaccaccccgaggaggtccacgc
cagagattgctgcctactccacgtggtgtaaatatgatcatgtggagcctggataatcgc
tttgtacttgctgcaataatggataacagaatatgtgtctggaatgctagtgatggcagc
ttggtgcactctttggctggtcatacagcatctacttatgttttggatgtgcatcctttt
aatccaagaattgctatgagtgctgggtatgatggcaaaacaatattgtgggatatatgg
gagggtactcctataagagtgtatgagataggtggacgcttcaagttagttgatgggaag
ttttcactggatggcacatcaatcgtgctttcagatgatgtagggcaaatatatctgctg
aacactggtgaaggagagtcccagaaagatgctaaatatgatcagttcttccttggggat
tatcgcccacttgcccaggacactcatggcaatgttgttgaccaggagacgcagcttgta
ccatatatgaggaatattcaagatcccctatgtgattcgagcatgcttccatacccagaa
ccttaccaaagtacatatcagcagcggcggctaggtgcattgggaattgaatggcgtcct
tcatccattaaatttgctattggcacagatattgggataggccaagagtttcagatacta
cctttaccagatttggatgttgtacttgaaccactaccagattatgtggatgctatgttc
tgggaacccgaaaatgatatcatacatgacgacaatgactcagaatacaatgtcactgaa
gagaattttagtgatgagcaaatttgtcccagtgatggaaactcaagtgattcagcctgt
agtgaagaagacgagattagagaaaacccgagagatagtatgcgccgatcaaaaaggaaa
aagtcttttcttgaagttgagcatagaacttctaccgacagacgtggtaagaagagagtt
ccagacgaaaaagagggtacttcatctagaagtaaaagatataaaaaatcaaaaatttct
ctgaggacatccagaaggaagtctaccaagtcaaagtcatcgagacctcagagggttgct
gcacgtaacgctataccagaaactactacagacgaagatggtgaagatggctctacaggt
gagacatcagatagtgagtcaccatccttggatggtttagctattcagagcaaagaacaa
agtgacaacctgatgaatgtgcaaagagaatacatgacatcttcacataagtctgaagaa
ttagtcaaaccttgtctaaaccaccctgatagccagatcaatgttggaaacaagaaaaaa
ttggtgcttaaattttctctccctcatcgcaagccacctgtcttgtctgggaacctggag
agtgaaactactattgcatcttcaacttctagaggttgtgaagaaaaccccaaagaagac
agggtcaatgccatgccagggaatctagcttcatcttctgtaattgtgatcgataaggaa
tggtctgaagaccataaaaggcagcctggcggtaatgaaagagcaacagaagctagtgcg
gtgagtgataacaaggtgaatttagggaagttcgaaacgggctcatcaaacggaacacag
ttaggaggctatgatgtgcatgatgtccgtactaatggaagcctacaagttgacaatggc
tatgatgtgtttaacagacaatatggagttgtagaaacagatttgtccacttctgatctt
catggatctaatagcctcactattgatgcaaaacccacttctgaacctcaaaataaatcc
aaaaggaaactcactataataaagatcaaaactaagaaagttcctggggagtctccttct
agacttccaggtttgaaccgcgcagacggttccacaggtgctgcagttgagtcaacatct
aaaattgttgaggaagaaccagctttccgagtgttaacgactgacaatttttcagacgaa
ccaaaccactctccatatgtccatggtgatggatttgatgacagtacacatgtcaacccc
tattatgaagaggcagaatatgaattgccagacttggcaactgattcagctcgtagagct
agatcctcgaggttgaaagctacatctttggagaatggttttgctaaccatacttcagcc
atgggtgtcgactatctgcaaccaggtacatcaagaagtgcggaaagatcctccaagaga
actgctgagaattgtccatcatggggatacaaacatgctggaagacctaagtcttcttcc
agtaacaagagagaaagtcactacaggggagacacaagctcttctgttgagaaaaacaaa
aaccagatgctcaagaaaactaactggctgctgttgtcagagcaggaggagggatttcgt
tacatcccccagcttggggatgaagttgtgtacttgcgacagggacatcaagagtaccta
gagcacagtgggacacaacaacgtggtccttggctgaggtatagagaagaagttagagct
gttgaaatttgtgtagttgaagagctaaagtatgtgccatgtcctggttctggagagagc
tgttgtgaaatcacactacgttttgtggatgcatcatgcagtgtagtaggccaaaaattt
tccttgacacttcctgaactggactttccagattttatcgttgtaaggtcacgatatgaa
gcagctgtgggcagaagctggaccactagagataagtgcctcgtgtggtggagagatgag
agcgagcaaggtggcacttggtgggaaggttgcattgttgctatcaaagataaatctagc
gatttccctggaagcccatgggaaagatatcatgtcaagtacaagaatgacgatgttgct
gatccgcatcgtcactgcccttgggaacttcacgatccagataggttatatgatcctcct
aggatttgcttcgaaagcaaagagaagatcctaagttctcttactaagttattgcagaag
gctagtagagacaaggataaatatggcatcatcaaattgagcgaaatcgcacagaagtcg
gattttgtgaacaggtttgttgttccactatctcctgagcttatcaagtcaagaatagaa
aacgactattatagaaacacaaaagctgtggagcatgatgttgaggtaatgatagaaaat
gctggattgtactttccgagaaatccaaaaatcatgaagaagatgaaccgcctatcaaat
tggtctgctgatatcttttcggacctgtga
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integrated database retrieval system
