Salvia splendens (scarlet sage): 121745471
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Entry
121745471 CDS
T07627
Name
(RefSeq) LEC14B protein-like
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121745471
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
121745471
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_Vps41
PEP5_VPS11_N
WDR54
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
121745471
NCBI-ProteinID:
XP_041995328
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All DBs
Position
8:25418287..25421273
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AA seq
475 aa
AA seq
DB search
MLSVAEDTDADSTIGYYFGKLEIENELSYGSSDYLPSRRKCDSFDQDIAQLTKLQSRPNE
HFSCVSPGNREFPVSTLKMLAGREANLSGRGRFSLPDCRHVLSRYLPVNGPWIVDQMSTR
AYVSQFSDDGSLLIAAFQGSQIRIYDVEREWKVRKNILARSLRWTITDTSLSPDQRCLVY
ASMSPVIQIVDAGSSTSESLANITEVHDGLDLSSQDDGGYSFGIFSLQFSTAGQEVVAGS
SNGHIHVCDLNAKKVSLRISAHTSDVNSVCFVDESGNLICSGSDDSFCKVWDRRCFAGSG
KPAGVLMGHLEGITFTDSRRDGRYLITNSKDQSIKLWDLRKMSPNSVCYRGYRNYEWDYR
WMNYPQRAKDFKHPHDQSVATYKGHSVLRTLIRCYFSPQYSTGQKYIYTGSHDSCIYIYD
LVSGAQVAKLQHHGSTVRDCSWHPTYPVLVSSAWDGEVVKWEFPGNGESTISNTK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctgtagctgaagatacagatgctgatagcaccataggctattattttggtaaa
ttggagattgaaaatgagctttcttatggctcaagtgattatttgcctagtcgaagaaag
tgtgattcattcgatcaagatatagctcagctaacgaagcttcagtcgaggccaaacgag
catttcagctgcgtttcacccgggaaccgtgagtttcctgtctcgactttgaagatgttg
gcaggccgagaagctaatctctcgggaagaggaaggttctcgttaccagattgtcgtcat
gttttaagtagatatctgccggttaatggcccttggattgtagaccagatgtctacaagg
gcttatgtgtctcagttttccgatgacggttccctgcttatcgctgcttttcagggtagt
cagattaggatatacgatgttgaaagggaatggaaagttcggaagaacattttggccaga
agcctaaggtggaccatcacggatacttccctttctcctgatcaacgatgccttgtctac
gctagcatgtcacccgtcatccagattgttgatgctggatcttctacgtctgaatctctt
gctaacatcaccgaagtccacgacggtttggatctctcttctcaggatgatgggggatac
tctttcggaatcttttctctgcaattctctactgctggccaagaagttgtggctggaagc
agcaatgggcatatacacgtttgtgacctcaacgcgaaaaaagtctctcttcgaatatct
gcacacacgtctgatgtcaacagtgtatgtttcgttgacgagagtggcaatctcatttgt
tctggcagcgacgacagcttctgcaaggtctgggacagacgttgctttgcagggagcggg
aagccagctggggtgctaatgggccatctcgaggggattaccttcactgatagccgcaga
gatggccgttatttgataaccaacagtaaagatcaatctatcaaactgtgggatctacga
aaaatgtctcctaactctgtttgctatcgaggatacaggaactacgaatgggattacaga
tggatgaactaccctcaacgagcaaaagattttaagcatccacacgatcaatccgtagct
acgtataaaggccattcagtcctgcgcacactcatccgttgttacttctcgccacaatac
agcacggggcagaagtacatctacacgggatcacacgattcctgcatctacatttatgat
ttggtgagtggcgcgcaagtggccaagttgcaacaccatggatctacggtgagggattgt
agttggcacccgacctacccggtgttggttagttcggcgtgggatggtgaagtggtgaag
tgggagttccctggaaatggagagtcaacaatcagcaacaccaaataa
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