Salvia splendens (scarlet sage): 121745548
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Entry
121745548 CDS
T07627
Name
(RefSeq) WD repeat-containing protein LWD1-like isoform X1
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121745548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121745548
03036 Chromosome and associated proteins [BR:
sspl03036
]
121745548
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
121745548
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
121745548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_Aladin
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR41
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
121745548
NCBI-ProteinID:
XP_041995436
LinkDB
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Position
8:complement(32085836..32089263)
Genome browser
AA seq
350 aa
AA seq
DB search
MGASSDPNQDGSDEQQRRSEIYTYEAPWHIYAMNWSVRKDKKYRLAIASLLEQFPNRVEI
VQLDDYTGEIRSDSAISFDHPYPPTKLIFVPDKDCQRPDLLASSSDFLRLWQISDSDSSS
RRVELKCLLNNNRNSEFSGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEKEVVDTQLIAH
DKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRY
MATIIMDSSKVVVLDIRFPTLPVVELQRHQAGVNAIAWAPHSSCHICTAGDDSQALIWDL
SSMGQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSNKLQILRES
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgagcagcgatccgaaccaagacggatcggacgagcagcagcgccgctcggaa
atctacacctacgaagccccatggcacatctacgccatgaactggagcgtccgcaaggac
aagaaataccgcctcgcaatcgccagcctcctcgagcagttccctaaccgcgtcgaaatc
gtccagctcgacgactacaccggcgagatccgctccgactccgccatctccttcgaccac
ccctacccccctaccaagctcatcttcgtccccgacaaggactgccagcgccccgatctc
ctcgcctcctcctccgatttcctccgcctctggcagatctccgactccgactcctcctcc
cgccgcgtcgagctcaagtgcctcctcaacaacaaccgcaacagcgaattctccggcccg
ctcacctccttcgactggaacgaagccgagccgcgccggatcgggacctccagcatcgac
accacctgcacgatttgggacatcgagaaggaggtggtcgatacgcagctcatcgcgcac
gataaggaggtctacgacatcgcctggggcggcgttggcgttttcgcgtctgtctccgcc
gacggctcggttagggttttcgatctccgcgacaaggagcattcgactataatttacgag
agctcggagccggacacgccgctggtgcggctcggctggaacaagcaggatccgagatac
atggcgacaatcataatggacagtagcaaggtcgtggtgttggatattcgcttcccgacg
ctgccggtggtggagctgcagcggcatcaggcaggtgtgaatgcgattgcgtgggcgccg
catagctcctgccacatttgcacggcgggggatgattcgcaggctttgatttgggacctc
tcgtcgatggggcagccggtggagggcgggttggaccccattctggcgtacactgccggg
gcggagattgagcagctgcagtggtcgtcctcgcagccggattgggtggcgattgcgttt
tcgaacaagctacagattctgagggagtcatga
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