Salvia splendens (scarlet sage): 121745593
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Entry
121745593 CDS
T07627
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121745593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121745593
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121745593
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
DUF7885
F-box-like
LRR_4
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
121745593
NCBI-ProteinID:
XP_041995487
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Position
8:complement(7244691..7247684)
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AA seq
582 aa
AA seq
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MAYSFPEEVLEHVFSFLSLARDRNAVSLVCKSWYEIERWCRHRIFVGNCYAVSPEIVIRR
FPELRAVEMKGKPHFADFNLVPEGWGAYAYPWIAAMAEAYPFLEEIKLKRMVVTDESLEL
ISKSYKNFKVLVLTSCEGFTTDGLASIAANCRHLRELDLRESEVEDLSGHWLSHFPDSCT
SLVSLNMSCLGSEVSFSSLERLVARSPNLRTLRLNRAVPLEKLANLVRHAPQLVELGTGA
YSSEIRSDTFSSLADAFSACKQLKALSGFWDVVPSYLPAVYSVCSGITSLNLSYAAIPSS
DLVKLISQCQNLQRLWVLDYIEDSGLEALAASCKDLQELRVFPSDPFGAEPNVSLTEQGL
VSVSEGCPKLESVLYFCRQMSNAALIAIARNRPNFIRFRLCIIEPQAADYLTLEPLDAGF
GAIVENCKELRRLSMSGLLTDRVFKYIGTHAKKLEMLSIAFAGESDLGLHHVLSGCDSLR
KLEIRDCPFGDKAVLANAAKLDTMRSLWMSSCSVSFGACKLLAQKMPRLNVEVIDERGPP
DSRPESCVVERVYVYRTVASRQRLDMPDFVWTLDEDSSMRYS
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactcgttcccggaggaagttctggagcacgtcttctcgttcctgagcttggcc
agggatcggaacgccgtctccttagtgtgcaagtcgtggtacgagatcgagcggtggtgc
cgccaccgcatcttcgtggggaactgctacgccgtttcgccggagatcgtgatccggagg
tttccggagctgagggcggtggagatgaaggggaagccgcatttcgccgacttcaacctc
gtgccggagggatggggcgcgtacgcgtacccgtggatcgcagccatggcggaggcgtat
ccgttcctggaggagatcaagctcaagcgcatggtggtcacggacgagagcttggagctg
atctccaagtcgtataaaaatttcaaagttctggtgctgacgtcatgcgagggtttcacc
accgacggtctcgcgtcaattgcggctaattgcagacatttaagggaactagatttgagg
gagagtgaagtggaggatctgagtgggcattggcttagccattttcctgatagctgcact
tctctggtgtcacttaacatgtcttgtttgggttctgaggtaagtttctcctcgttggag
agactggttgcacgttcacctaacctgaggactctccggctgaaccgtgctgtacccctt
gagaagcttgctaaccttgtccggcatgccccccaattggttgaattgggtactggtgcc
tattcatctgaaattcggtccgatactttttcaagcctggctgatgcattttcagcatgt
aagcaactcaaagctttgtctgggttttgggatgtggttccttcatatcttccagctgtg
tattctgtctgttccggaatcacttcactgaatttaagttatgctgccattccaagttct
gatcttgttaagcttattagccaatgccagaatttgcagaggctatgggtcttggactac
attgaagacagtggactagaagctcttgctgcatcttgcaaggatctgcaagaacttagg
gttttcccttccgatccttttggggcagaacctaatgtgtctttgacggaacaagggctt
gtatctgtctctgaaggttgccccaagctcgaatctgttctgtacttttgccgccagatg
tcaaatgctgcattgattgctattgccaggaaccggcctaactttattcgtttccggctc
tgtatcattgagcctcaagctgctgactacttaaccctcgaaccacttgatgctggtttt
ggagccattgttgagaactgtaaagaactgcgccggctttccatgtccggcctcctcact
gaccgcgtgttcaaatatattggaacccatgccaagaagttggagatgctttcaatagcc
ttcgctggggagagtgacttgggcctccatcacgtgttatctggctgcgacagcctccgg
aaactggagatcagggactgtccatttggtgacaaggctgtattagccaatgctgcaaag
ctagacacaatgcgatccctttggatgtcttcttgctccgtgagtttcggagcttgtaag
ctgctcgcacagaagatgcctaggctgaacgttgaagtcatagacgagagaggcccaccc
gattcaaggcctgaaagctgcgttgttgagagagtgtatgtctaccgcactgttgctagc
aggcaaaggctcgacatgcctgactttgtctggactctggatgaggattcatccatgagg
tattcctaa
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