Salvia splendens (scarlet sage): 121745621
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Entry
121745621 CDS
T07627
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121745621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121745621
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121745621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
121745621
NCBI-ProteinID:
XP_041995535
LinkDB
All DBs
Position
8:24928808..24933499
Genome browser
AA seq
397 aa
AA seq
DB search
MDSFTDEAKLFIGGIGWETTEEHLRDHFGRYGEVAHAVVMRDRVTSQPRGFGFVVFSDPS
VIPSVLQQSHSIEGRTVEAKRAMSREQQQTLKTGSNSTGGNFVGSENLKSKKIFVGGLPS
TLKEDEFRGYFQDFGSVTDVVIMYDTNTGRPRGFGFISFTTEDSVDRVLQKTFHELKGKL
VEVKRALPKDAVTGVGSRGSSRGYGSNFSSNESYTSPIGNSRMLQQTQPSNGGYHPNQPT
SGGYQQTQPASGGYPPYSVYGGANYGYAGNSNPGYGAYGGYEVGGHGSANAGYSGPAGVY
GNLGSPNTDFLKNQWSSQQAGYGASGYGQTANYGASVSWSNASRSSASGYAQAGRPPSGA
SQFVNKGYNYNGYGDDASHAYAGGNAMHPDGSWKPES
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggactctttcaccgatgaggcgaagctcttcatcggcggcataggctgggagacgacg
gaggagcacctcagagaccatttcggccgctacggcgaggtcgctcacgccgtcgtcatg
cgcgacagagtcacctctcagccccgcggcttcggcttcgtcgtcttctccgatccctcc
gtcatcccctccgtcctccagcaatcgcatagcatcgaaggccgcaccgttgaagctaag
agagcgatgtcaagagaacagcagcagactctgaaaaccggaagcaatagtactggagga
aattttgtagggtctgagaatctcaaaagtaagaagatatttgtcggggggttgccttct
accttaaaagaagatgaatttaggggatattttcaagattttggtagtgtaactgatgta
gtgatcatgtatgatacaaatactggccggccacgtggttttggtttcatcagctttacc
acagaagattctgttgatagagttcttcaaaagacctttcatgagctgaaaggtaagctt
gtcgaggtaaaacgagcactccccaaagatgcagtcacaggtgttggttctcgtggaagc
tccagaggctacggctcgaatttttctagtaatgaatcatacactagtcctattggaaac
agtagaatgttacagcaaacacaaccatcaaatggtggttatcacccaaatcaacctaca
agtggtggttaccaacagacacaaccagcaagtggtggttatcctccttattcagtttat
ggaggtgctaactatggttatgcagggaatagcaatcctggctacggtgcttatggtggc
tatgaggtcggtggtcatggaagtgccaatgctggttattctggtccagcaggagtttat
gggaacctaggttcaccaaataccgatttcttgaaaaatcaatggagtagccaacaagct
ggttatggtgcctctggatatggtcaaactgctaactatggggcttctgtttcttggagc
aatgcatcgaggagtagtgccagtggttatgcacaagcaggaagacctccgagcggtgct
tctcagtttgttaataaagggtacaactataatggttatggggacgatgcatctcacgcc
tatgctggtgggaatgcaatgcatcccgatggtagttggaaaccggaaagttga
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