Salvia splendens (scarlet sage): 121746127
Help
Entry
121746127 CDS
T07627
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl00040
Pentose and glucuronate interconversions
sspl01100
Metabolic pathways
Module
sspl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121746127
Enzymes [BR:
sspl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
121746127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
121746127
NCBI-ProteinID:
XP_041995976
LinkDB
All DBs
Position
8:complement(33331614..33333141)
Genome browser
AA seq
355 aa
AA seq
DB search
MKAFADAWKNACQTPGGVVTVPAGETFLVSSGEFEGPCNGQTLFQMDGILVASEDLKLDD
TEFWITFHKIDDLVLSGTGVFDGKGALSWSLCDRSSNCHHRPASLRIHDVTNAYIQGITS
LNSKMFHFHIHNSQNVNVENIHITAPHDSPNTDGIHISNSRDVKIADTVIGTGDDCVSLG
DGCANVNISGVACGPGHGISIGSLGKYSDEEDISGVTVMNCSLSNTSNGLRIKTWAPSKS
SIVVSDITYADITLDNVTNPIIIDQHYCPHDECQKEGESSIQIKGVKYINVRGSSTTEEG
IKVKCSKSNPCEDVEFSGVELNVNGNPAIASCSNVGGLFLESNPVCPNLLPLCIK
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcattcgcagatgcatggaagaacgcttgtcaaactccgggaggcgttgttacg
gtgcctgccggagaaactttcttagtgagcagtggagaattcgaagggccgtgcaacggc
caaaccctgtttcaaatggatggaatcctagttgcttccgaggacttgaaactcgacgat
actgaattttggattacttttcataagattgatgacctcgtactttccggaacaggcgtc
tttgacggcaaaggagccttgtcttggtccctatgcgacagatcatccaactgtcaccat
cgtcctgcttcactaaggattcatgatgtgacaaatgcctatatccaaggcataacctcc
ctaaacagcaagatgttccatttccacatccacaattcccaaaatgtgaatgtggaaaac
atccatatcacggccccacacgacagcccgaacaccgacggaatccacatcagcaactcg
agagacgtgaagatcgccgacacggtcataggcacaggcgacgactgcgtatcgttggga
gacgggtgcgcaaatgtcaacatctcgggggtcgcgtgtgggcccggccacggcatcagc
attggaagcctagggaagtatagtgatgaggaagatatcagtggagtaacagtgatgaat
tgtagcttgagcaatacaagcaatggattaaggatcaaaacatgggcaccctctaaatca
tcaattgttgtttctgatatcacatatgctgacatcacattggacaatgttacaaaccca
atcatcatagatcaacattattgccctcatgatgaatgtcaaaaagagggagagtcgagc
attcaaataaagggtgttaagtacatcaacgtacgagggagttcgacgacagaggaggga
ataaaggtcaaatgtagcaaatcgaacccgtgtgaagatgtggagttctctggtgttgag
ctaaatgtgaatgggaatccagcgattgcgagttgctctaacgttggtggtctatttcta
gaatctaatcctgtttgtcctaatctacttcctctatgtattaaatag
DBGET
integrated database retrieval system