Salvia splendens (scarlet sage): 121746508
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Entry
121746508 CDS
T07627
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121746508
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
121746508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
Motif
Other DBs
NCBI-GeneID:
121746508
NCBI-ProteinID:
XP_041996310
LinkDB
All DBs
Position
9:14639314..14654815
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AA seq
1969 aa
AA seq
DB search
MWTNIFKIGGLHRISWFQFLPNEFDFSALPDKSVKVDPKDAAMSAVLSAHLQLQKEGFLS
AWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGQHSSINEKAQHAVATLRVLASGFWVSPGD
SEEVASAISQALRNCIERALRGFSYVRFGDVFSKYQPFTQNEELFRRGQPVAEFIFAATE
ETIFVHVIISAKHVRALSTGDIEPFLSSSSRRTNDQISVVVSPHGMRGKLTGCCPGDLVK
QVFLSSGKFRDPNGTSGLPFKVARGSGLPTQQRGQNCFVEVTLGCQEKLARDSANLHSNF
SQPHGTESPASRICNQRWPLDKLPICEKKFVYPTEAVLVPVMQTSFARSSLKRFWLQNWA
GPSLSASSLVMHCFDFGSDDKVDSMDGSSLEPSGTRSYHGYRSSSNSNSSSYGSMSSSSS
DSDRKVLGARDLEADADSLMSRQSGLSSLGQMPNDVLQLGSKRPRSGTSESFGQAGMVLN
PSMTDYGTMEANMSINGATNETVGSQWGWDDDDRGMGMDIQALLSEFGDFGDFFENDALP
LGEPPGTAESQVLMFPAPDGGELCSSPSTSVIDVPDRMLVSTGFPTFDNFNQLNAPDSVE
DSVIKNQETTKSSAPRQVTCMLPSSNIEFDHVVKAEALMSFAPEYGGVEAPNSEISSVIF
RSPYIPRSCKVDSASSSSHYVYSATPPSPCCNGSHEKSILPSEKACTEKKELCSAFKSKK
YYTHVERGKQQTGASHNSLSKSEVGGSSAQFFALSQADVKPISAKASDSSQKGDNCLPSA
RTVLATEIECLVCQVSMCRLRHTLLSSSNISPSSLSGLSCSSTQNLGHNDSSTMVDNMSC
KSELKKKETIPVRIAGDVDGGMLDGSLTAPVGVWRSVGIPKVAKTGSSNMEVCPSIPHNS
FMEESMLSYGLRQPLQELLDGIAFLVQQATSFVDVALDADCGDGPYGWLALQEQRRRGFS
CGPSMVHAGCGGLLASSHSLDIAGMELVDPLSVDVQASLTIGLLQSDIKEALKSAFSNAD
GPLSVMDWCRGRNPSNESAMTYDGHSAEYIASASECRDSSSTVTLSVGDPMSPSLTSAGG
ASGLKGDGTRGDDGGTSLMESDQQHCSWIRPTLSVVPFPSILVGYQDDWLKTSAGSLQLW
EKAPLEPYATVKHMSYYVVCPNIDPLTTAATDFFLQLGTVYETCKLGTHSPQSLGNELDI
DSKKISPGFALLDCPQSMKIDTNNASMLGSISDYFLFLSNGWDLTSYLKTLSKVLKTLKF
GSSVPGNSKEGNGGPCTVVYVVCPFPEPLAVLQTVVEASIAIGSVIRSSDKERRSMMHNQ
VAKALSYPASVDESFSNVLTLTGFSIPKLVLQIVTVDAIFRVTSPKLNELIILKEIAFTV
YNKARRISRGASGETMSSLSVPGGSHSVLMQMSPSVPGMWKDCVGSRIGGPPLQRESELD
TSLRQGAWDNSWQTARSGGLGADPSRTGDIFPLDDIRCLFEPLFILAEPGSIERGLSPFF
GNSADSSKLSDDCTSTSFVQNSTSSVTGDNGPVSQHDSLDSDGLTSGHQKSIPSLHCCYG
WTEDWRWMVCIWTDSRGELLDSCVYPFGGISSRQDTKGLQSLFVQILQQGCQILQACSPD
AGVAKPRDLVITRIGCFFELECQEWQKALYSAGGSEVKKWSLQLRRSLPDGMPAGSNGNS
LQQQEMSLMQERALPSSPSTLYSPHSKSSSFMKGGIAQPSSRKQLMGGHAVLDNSKGLLQ
WVQSISFVSVSIDHSLQLVLQADSSPGSSQGSATSGLSGYLEGYTPVKSLGSTSASYLLV
PSPSMRFLPPSVLQLPTCLTADSPPLAHLLHSKGSAIPLSTGFVVSKAVPSMRRDARSLS
KEEWPSVLSVSLIDYCGINVVSQEKSGKGANKPVGRGVSSESKDIEVETHIILDTIAAEL
HALSWMTASPAYLERRSALPFHCDMVLRLRRLLHFADKERSRLPEKAPT
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atgtggacaaatatattcaaaatcggaggtttgcatcggatatcatggtttcagtttctt
cccaatgaatttgatttcagcgctctacctgataagagtgtgaaggtggacccgaaagat
gcagcgatgtcggcagtgctctcagcacatctgcagctgcagaaggaagggtttctcagc
gcatggactaactctttcgttggaccctgggatccttctcagggtctgcataatcctgat
gagaagattaagctttggctttttctccctggtcaacactcctctatcaatgagaaggca
caacatgctgttgccacattgagagtgctcgcatctggattttgggtgtctcctggcgat
tctgaagaagttgcttctgccatatcacaggctttaagaaactgtatagaaagagcactt
agaggcttttcatatgtacgatttggggatgtgttctccaagtatcagccatttactcag
aatgaagaactattcaggaggggtcaacctgtcgctgagttcatctttgctgcaacagaa
gaaacaatatttgttcatgttattatatctgctaagcatgtcagagctctttcaactggc
gacattgaacctttcctcagcagctctagccggcgtaccaatgaccaaatttcagttgtt
gtttctcctcatggaatgcgtgggaagctcacgggatgttgtcctggtgatcttgtaaag
caagtgtttctgagctccggaaagtttagagatccaaatggaacttcaggtcttcctttc
aaagttgctcgaggatctggactgccaactcaacaaaggggacaaaattgctttgttgaa
gtgacccttggttgtcaagaaaagctggcgcgggatagtgcgaacttgcatagtaacttt
tctcagcctcatggcactgagtctccagcttctagaatatgtaatcagaggtggccttta
gacaagcttccaatttgtgaaaaaaagtttgtctatccaacagaggctgttcttgttcca
gttatgcagacatcttttgcaagatcatctttgaaaagattctggctgcaaaattgggct
ggaccgtctttgtcagcttcatcacttgttatgcattgttttgattttggcagtgatgac
aaagttgattcaatggatggatcttctcttgaaccaagtggaactcgttcttaccatggt
tatcgtagtagtagtaacagtaatagtagtagctatggcagcatgagcagttcctcaagt
gacagtgatcgcaaggtcctgggagctcgtgatcttgaggcagatgcagattctttaatg
tccagacagtctggtttatcttccctgggtcagatgccaaatgatgtccttcaattgggt
tctaaaaggccacgaagtgggacttccgagtcatttggtcaagcaggcatggttttgaat
ccttccatgacagattatggtaccatggaagccaatatgtctattaatggggctacaaat
gaaactgttggatctcagtggggatgggacgatgatgatagaggcatggggatggatatt
caagcactactatcagagtttggcgattttggtgacttttttgagaatgatgctttgcca
ctcggggagcctccagggactgctgagtctcaagttctcatgtttcctgcgcctgatggt
ggtgagttgtgtagcagccccagcacctcagtgattgatgtgccagatcgaatgcttgta
tcgacaggttttccaacctttgataacttcaaccaactaaatgctcctgattctgtggaa
gattcagtcatcaaaaaccaagaaaccacaaagagttctgctcccaggcaagttacttgt
atgctgccatcttccaatattgagtttgatcacgtcgtaaaggctgaagcactgatgtca
tttgccccagaatatgggggtgtggaagcccctaacagtgagatctcctctgtgattttt
cgaagcccctacattcctagatcttgcaaagtggattctgcatcaagctcaagccattat
gtgtactctgcaacacctccttccccttgctgtaatggatctcatgagaagtccatcttg
ccaagtgagaaagcttgtacagaaaagaaagaattgtgttctgcgtttaaatcaaaaaaa
tattacacacatgttgaaagaggaaagcagcaaactggtgcaagtcataatagtcttagc
aaaagtgaagttggaggttcatcagcacagttttttgctttgagccaagcagatgtcaaa
cctatctcagctaaagcaagtgacagctcacaaaaaggagataattgtctcccatccgct
aggactgtccttgcaacagagattgaatgcctagtgtgccaggtttccatgtgtaggttg
cgacatacactgctttcttccagcaacatttcaccttctagtctgagtggattatcttgt
agcagcactcaaaatctaggtcataatgattcaagcaccatggtggacaatatgtcatgc
aaatctgagttgaaaaagaaagaaacaattcctgttaggatagctggtgatgtagatggg
ggaatgctagatgggtctttgactgcaccagttggggtctggcgttctgttggaattccc
aaagttgctaagacaggttcatcaaatatggaggtctgcccatccattccacataattca
ttcatggaagaaagtatgctttcatacggactacggcagccactacaggaacttcttgat
ggtatcgcattccttgttcagcaagctacttcatttgttgatgtggctctggatgctgat
tgtggtgatggtccatatgggtggctcgcacttcaagagcagaggaggcgtggattttca
tgtggaccctctatggtacatgctggctgtgggggtcttttggcttcttcccattccctg
gacattgctggaatggagcttgttgatccactctcagttgatgtccaggcttctttaaca
attggtttacttcagtctgacataaaagaagcgttgaaatctgcatttagcaatgcagat
ggccctctttctgttatggattggtgtaggggccgtaacccatccaatgaatcggcgatg
acttatgatggacactctgcggagtatattgctagtgcaagtgaatgccgagattcttct
agtacagtaactttatccgtaggagatcccatgagcccatctctgacctctgctggtgga
gcatctgggctcaaaggtgatggaaccaggggggatgatggaggtacttctctgatggag
tcagatcagcaacactgctcatggatacggcctacactatctgttgttccatttccatca
atacttgttgggtaccaagatgattggctcaaaacctcagccggttccttgcaactgtgg
gaaaaggctcctctggaaccttatgcaactgtgaaacatatgagctactacgtggtatgt
ccaaatattgatccacttacaacagctgctactgatttttttcttcagcttggaactgtt
tatgaaacctgcaagctgggaacacattcaccccaaagtctgggaaatgagttggatata
gattccaagaaaatatcacctggttttgctcttcttgattgccctcaatcaatgaagata
gataccaacaatgcatctatgttgggatcaatcagtgattatttccttttcctatcaaat
ggctgggacctgactagttatttaaagactctttctaaggttcttaagaccttgaaattc
ggttcgtctgtgccagggaattccaaggaaggaaatggtggaccatgcactgttgtttat
gtggtctgccccttcccagagcctcttgcagtcctacagactgtggttgaagcttcgatt
gctatcggatcagtgattcgatcttctgataaagaaaggagatccatgatgcacaatcaa
gttgcaaaagctttgagttaccctgcttctgtagatgaatcattttcaaatgttttgact
cttacaggatttagcatcccaaagcttgtattgcagattgtgactgtagatgccatattt
agggttactagccccaagctaaatgagctgatcattctaaaggaaattgctttcactgtt
tacaataaggctcggcgaatttcacggggagcatctggtgagacaatgtcatcattatct
gtgccagggggttctcattcagtcttgatgcaaatgtctccgtcagttcctggtatgtgg
aaggattgtgttggttctcgaattggaggacctcctcttcagagagagagtgaacttgat
acaagcttgagacagggtgcttgggacaactcttggcagacagcaaggagtggggggctt
ggagcagatcccagcagaactggagatatctttcctctggatgatattcgttgtttgttt
gaaccactttttattcttgcagaacctggatccattgagcgtgggctttcaccctttttt
ggtaattcggcagattcatcaaagctgtcagatgattgcacaagtactagctttgtgcaa
aattctacttcttcagtaactggggataatggtcctgtttctcagcatgattccttggat
tcagatggtttgacatctggccaccaaaaatcaatcccaagtctgcattgttgttatggg
tggactgaggattggcgctggatggtgtgcatatggacagattcaaggggagaattgctt
gacagttgtgtttacccctttggaggaatcagtagtcggcaagacacaaagggtctgcag
tccctttttgtccaaatactacaacaaggatgccagattcttcaagcttgttctcctgat
gctggtgtagctaagcctagagatctcgtgattacacgaattggatgcttttttgagctc
gagtgccaggagtggcagaaagctttatattcagctgggggttctgaggtgaaaaagtgg
tctctgcagctccgtcgttcccttcctgatggaatgccagctggcagcaatggaaattct
ttacaacagcaggagatgagtttaatgcaagagagggcactgccttcttcaccaagtaca
ttgtacagtcctcattctaaatcttcctcattcatgaaaggtggcattgcacaaccttcc
tcgaggaagcagctaatgggtgggcatgcagtgttagacaattcaaaaggcttactgcaa
tgggtacagagcatcagttttgtctcagtctcgattgatcattcattacaactggtgtta
caagcagattcatctcctgggtcaagtcaaggtagtgccacgtcaggtctgtcaggctat
cttgaaggatacacacctgtgaagtcccttgggtctacatcagcttcctaccttttagtc
ccttcaccgagcatgcgctttctgcctccttcggttcttcagctccctacatgtctcact
gcagattccccgcctctcgcccatcttctacatagcaaaggatctgcaattcccctgtcc
acgggttttgtcgtttcaaaagcagtaccttcaatgaggagagatgccaggagtttatca
aaagaagaatggccttcagttctctctgttagtttaattgactattgtggaattaacgtt
gtcagccaagagaagtcagggaagggtgccaataagcctgtggggcgaggtgtgagctct
gaatccaaagatatcgaggtggaaacgcacatcatactagatacaatagcagcagaactc
catgctttgtcctggatgactgctagcccagcatacttggagagaagatccgctttgcct
ttccattgtgacatggttctgagactcagaaggcttctccattttgcagataaggaacgc
tcccggcttccagagaaggcaccgacatga
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integrated database retrieval system
