KEGG   Salvia splendens (scarlet sage): 121746533
Entry
121746533         CDS       T07627                                 
Name
(RefSeq) DNA mismatch repair protein MSH2-like
  KO
K08735  DNA mismatch repair protein MSH2
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    121746533
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sspl03400]
    121746533
DNA repair and recombination proteins [BR:sspl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     121746533
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_I MutS_II
Other DBs
NCBI-GeneID: 121746533
NCBI-ProteinID: XP_041996348
LinkDB
Position
9:4316017..4322175
AA seq 941 aa
MGDNFEEHNKLPELKLDAKQAQGFISFFKKLDADPRAIRFFDRKDYYTTHGENATFIAKT
YYHTTTAVRQLGSGSDAISSVSVSKNMFETVARDLLLERTDHTLELYEGNGANWRLVKSG
SPGNLGSFEEILFANNEMQDSPAIVAVLSNLRESGCTVGLGYVDLTKRVLGLAEFPDDSH
YTNLESTLVALGCKECLLPGDIAKSSDFKSLTDALSRCGVMVMERKRVEFKGRDLVQDLG
RLVKGSIDPVRDLLAAFEFAPSALGCVMSYADLLADETNYGNYKIQRYDLDSYMRLDSAV
MRALNVMESKSDANKNFSLFGLLNRTCTAGMGKRLLHMWLKQPLLDVDEINSRLDLVQAF
VEDAALRQDLRQHLKRISDIERLTRSLEKKKASLVHVVKLYQSSIRLPFIKNALEQYNGQ
FALLIKERYLDPLDTWTDDKHLNRFIALVETSVDLDQLENGEYMISSGYDSQLLTLKNEQ
ESLEQAIHDLHRKAANDLDLPIDKALKLEKGTQYGYAFRITKKEEPKVRKKLNVHFIVLE
TRKDGVKFTNTKLKKLSDQYQKVVEEYKSCQRELVARVVQTAASFSEVFEGLAWTLSEMD
VLLSFADLAAGSPTAYTRPTISPPDEGDIILEGSRHPCVEAQDWVNFIPNDCKLLRGKSW
FQIITGPNMGGKSTFIRQVGVNILMAQIGSFVPCDNASISIRDCIFARVGAGDCQLRGVS
TFMQEMLETASILKGATNRSLIIIDELGRGTSTYDGFGLAWAICEHIVEVIQAPTLFATH
FHELTALAPESASNEQSSKKLPGVSNYHVSAHIDSSSRKLTMLYKVEPGACDQSFGIHVA
EFANFPESVVALARAKASELEDFSPAAILPSDPKEVGTKRKRAEDSDDVTKGAERARQFL
KDFSELPLDKMELEQALEQVRKLKEGLEKDAVNSCWLQKFF
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgggcgacaattttgaggagcacaacaagcttcccgaactcaaactcgatgccaaacaa
gctcaagggtttatctcattcttcaaaaagctagacgctgacccacgagccattcgattc
ttcgatcgcaaggattactatactacacatggagagaatgcaaccttcattgccaagacc
tattaccacacaacaactgctgtgcgccaactaggaagtggctcggatgccatttctagt
gtcagtgtaagcaagaatatgtttgagactgtggcccgcgaccttcttttggagaggact
gatcacactcttgaactgtatgagggcaatggagcgaattggagacttgtgaaaagtgga
agccctggaaatttaggcagttttgaagagattctgtttgccaataatgaaatgcaggac
tctccagcaattgtagctgtcctatcaaatttacgtgaaagtggatgtactgtagggtta
ggctatgtcgatcttactaagagagtacttggattggctgagttccctgatgatagccac
tatacaaatttggagtcaactcttgttgctcttggctgtaaggaatgccttctgcctgga
gatattgcaaaatctagcgattttaaatcattaactgatgcattgtccaggtgtggtgta
atggtgatggaaagaaaaagggttgagtttaaagggagagatttggtacaagatcttggt
aggcttgtgaaaggctcgatagatccagtaagagatctgcttgctgcatttgaatttgca
cccagtgctcttgggtgtgtaatgtcttacgcagatctacttgcagatgagaccaattat
ggtaactacaagatccaaaggtatgatcttgatagttatatgagattagattctgctgta
atgagggcactaaatgtcatggagagcaaatctgatgctaataaaaactttagcttattt
ggtctcttgaatagaacctgtaccgcaggaatgggcaagcgcctattgcacatgtggctg
aaacaacccctgttagatgtagatgagataaactctaggctggatttggtacaagctttt
gtggaggatgctgccctacgccaagatctaaggcagcatttgaaaagaatttcagatatt
gagcgactgacgcgctctcttgagaagaaaaaagctagtctagttcacgttgttaagctt
tatcagtctagcatcaggcttccattcataaaaaatgcattggaacagtacaatggacaa
tttgctttgttgattaaggagaggtacttggatcctctagacacatggactgatgataag
catttgaacagattcattgctcttgtcgaaacttctgtcgaccttgatcaacttgagaat
ggagaatacatgatttcatcagggtatgattcacagttattgactttgaaaaacgagcaa
gagtctctggaacaagcgatacatgatttacacagaaaagctgctaatgatcttgatctg
cccattgataaagctctgaaactagagaaagggacacaatatggatatgcttttaggatt
accaaaaaggaggagccaaaagtgaggaaaaagctcaatgtgcactttattgttcttgaa
actcgcaaggatggggtgaagttcacaaacactaagctaaagaaactaagtgaccaatac
cagaaggtggttgaggaatataaaagttgccagagagaattggttgcccgagtagtccaa
actgctgcaagtttttcagaggtgtttgaaggattagcttggacgctttctgagatggat
gttttacttagttttgcagatttggctgctgggtcccccaccgcttacacacgacctacc
atctctccaccagatgagggagatattattttagaagggagtcggcatccttgtgttgaa
gctcaagactgggtgaactttatccctaatgattgcaagcttcttagggggaaaagctgg
ttccagattatcacaggacctaatatgggtggaaaatcaacattcatacgacaggttggt
gtgaatattctaatggcacagatcggttctttcgttccatgtgacaatgctagcatttct
atacgtgactgcattttcgctcgtgtgggcgctggtgactgccagctacgtggggtttca
acattcatgcaagaaatgctagagacagcatctatcttgaaaggagcaacaaacaggtcg
ttaatcatcattgatgagctaggtcgtggcacgtcaacatatgatggatttggcctagct
tgggcaatttgtgagcatatagttgaagtgatacaagcacccacactatttgcaactcac
tttcatgagctgactgccttagctcctgaaagtgctagcaacgagcaatcttccaagaaa
cttccaggagtatctaattatcatgtgagcgcacacattgattcgtcaagtcgcaagctt
acgatgctttacaaggttgaaccaggagcctgtgatcaaagttttggcatacatgttgcg
gaatttgctaacttcccagaaagcgttgttgcccttgcccgagctaaggcttctgaatta
gaagatttctcaccagcagcaattttaccatctgatcccaaagaggttggaaccaaacgg
aagcgagcagaggactctgatgatgtaactaagggcgccgaacgggctcgccagttcttg
aaggacttctctgagctaccattagataagatggagttggaacaagcgctagaacaagtc
agaaaattgaaagaagggttagagaaggatgcagttaacagctgctggctccagaaattc
ttctag

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